Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24896 | 74911;74912;74913 | chr2:178571446;178571445;178571444 | chr2:179436173;179436172;179436171 |
N2AB | 23255 | 69988;69989;69990 | chr2:178571446;178571445;178571444 | chr2:179436173;179436172;179436171 |
N2A | 22328 | 67207;67208;67209 | chr2:178571446;178571445;178571444 | chr2:179436173;179436172;179436171 |
N2B | 15831 | 47716;47717;47718 | chr2:178571446;178571445;178571444 | chr2:179436173;179436172;179436171 |
Novex-1 | 15956 | 48091;48092;48093 | chr2:178571446;178571445;178571444 | chr2:179436173;179436172;179436171 |
Novex-2 | 16023 | 48292;48293;48294 | chr2:178571446;178571445;178571444 | chr2:179436173;179436172;179436171 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.001 | N | 0.187 | 0.153 | 0.0551355673512 | gnomAD-4.0.0 | 3.42164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5983E-06 | 1.15942E-05 | 0 |
N/T | rs1708142554 | None | None | N | 0.059 | 0.181 | 0.0920862733494 | gnomAD-4.0.0 | 2.73731E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.57308E-05 | None | 0 | 0 | 8.99575E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1291 | likely_benign | 0.1337 | benign | -0.853 | Destabilizing | 0.002 | N | 0.186 | neutral | None | None | None | None | N |
N/C | 0.1509 | likely_benign | 0.1543 | benign | 0.018 | Stabilizing | 0.131 | N | 0.371 | neutral | None | None | None | None | N |
N/D | 0.12 | likely_benign | 0.1258 | benign | 0.106 | Stabilizing | None | N | 0.051 | neutral | N | 0.399142549 | None | None | N |
N/E | 0.2402 | likely_benign | 0.2593 | benign | 0.195 | Stabilizing | 0.004 | N | 0.198 | neutral | None | None | None | None | N |
N/F | 0.29 | likely_benign | 0.3092 | benign | -0.735 | Destabilizing | 0.021 | N | 0.583 | neutral | None | None | None | None | N |
N/G | 0.2405 | likely_benign | 0.2472 | benign | -1.164 | Destabilizing | 0.009 | N | 0.198 | neutral | None | None | None | None | N |
N/H | 0.1036 | likely_benign | 0.1093 | benign | -0.732 | Destabilizing | 0.257 | N | 0.353 | neutral | N | 0.484838736 | None | None | N |
N/I | 0.084 | likely_benign | 0.0844 | benign | -0.072 | Destabilizing | 0.003 | N | 0.225 | neutral | N | 0.46023108 | None | None | N |
N/K | 0.2821 | likely_benign | 0.3009 | benign | 0.066 | Stabilizing | 0.007 | N | 0.202 | neutral | N | 0.437660864 | None | None | N |
N/L | 0.0958 | likely_benign | 0.0979 | benign | -0.072 | Destabilizing | None | N | 0.213 | neutral | None | None | None | None | N |
N/M | 0.1528 | likely_benign | 0.1616 | benign | 0.199 | Stabilizing | None | N | 0.249 | neutral | None | None | None | None | N |
N/P | 0.2251 | likely_benign | 0.2488 | benign | -0.303 | Destabilizing | 0.041 | N | 0.511 | neutral | None | None | None | None | N |
N/Q | 0.2323 | likely_benign | 0.2502 | benign | -0.496 | Destabilizing | 0.041 | N | 0.311 | neutral | None | None | None | None | N |
N/R | 0.3205 | likely_benign | 0.3439 | ambiguous | 0.084 | Stabilizing | 0.021 | N | 0.304 | neutral | None | None | None | None | N |
N/S | 0.0706 | likely_benign | 0.0711 | benign | -0.651 | Destabilizing | 0.001 | N | 0.187 | neutral | N | 0.476043107 | None | None | N |
N/T | 0.0647 | likely_benign | 0.0653 | benign | -0.357 | Destabilizing | None | N | 0.059 | neutral | N | 0.390715066 | None | None | N |
N/V | 0.0871 | likely_benign | 0.0881 | benign | -0.303 | Destabilizing | None | N | 0.271 | neutral | None | None | None | None | N |
N/W | 0.5951 | likely_pathogenic | 0.6177 | pathogenic | -0.484 | Destabilizing | 0.633 | D | 0.356 | neutral | None | None | None | None | N |
N/Y | 0.1227 | likely_benign | 0.1265 | benign | -0.264 | Destabilizing | 0.102 | N | 0.569 | neutral | D | 0.522183616 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.