Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24898 | 74917;74918;74919 | chr2:178571440;178571439;178571438 | chr2:179436167;179436166;179436165 |
N2AB | 23257 | 69994;69995;69996 | chr2:178571440;178571439;178571438 | chr2:179436167;179436166;179436165 |
N2A | 22330 | 67213;67214;67215 | chr2:178571440;178571439;178571438 | chr2:179436167;179436166;179436165 |
N2B | 15833 | 47722;47723;47724 | chr2:178571440;178571439;178571438 | chr2:179436167;179436166;179436165 |
Novex-1 | 15958 | 48097;48098;48099 | chr2:178571440;178571439;178571438 | chr2:179436167;179436166;179436165 |
Novex-2 | 16025 | 48298;48299;48300 | chr2:178571440;178571439;178571438 | chr2:179436167;179436166;179436165 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.003 | N | 0.211 | 0.063 | 0.166414681773 | gnomAD-4.0.0 | 6.84332E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99583E-07 | 0 | 0 |
E/K | rs751312481 | None | 0.007 | N | 0.428 | 0.152 | 0.236278675362 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20732E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs751312481 | None | 0.007 | N | 0.428 | 0.152 | 0.236278675362 | gnomAD-4.0.0 | 7.69022E-06 | None | None | None | None | N | None | 1.01561E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs751312481 | -0.634 | 0.883 | N | 0.699 | 0.178 | 0.19670166235 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/Q | rs751312481 | -0.634 | 0.883 | N | 0.699 | 0.178 | 0.19670166235 | gnomAD-4.0.0 | 3.18381E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7188E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0973 | likely_benign | 0.0946 | benign | -0.264 | Destabilizing | 0.682 | D | 0.757 | deleterious | N | 0.464768511 | None | None | N |
E/C | 0.6541 | likely_pathogenic | 0.6408 | pathogenic | -0.093 | Destabilizing | 0.996 | D | 0.845 | deleterious | None | None | None | None | N |
E/D | 0.0908 | likely_benign | 0.0851 | benign | -0.239 | Destabilizing | 0.003 | N | 0.211 | neutral | N | 0.481787283 | None | None | N |
E/F | 0.5541 | ambiguous | 0.5415 | ambiguous | -0.204 | Destabilizing | 0.909 | D | 0.861 | deleterious | None | None | None | None | N |
E/G | 0.1256 | likely_benign | 0.1265 | benign | -0.432 | Destabilizing | 0.682 | D | 0.766 | deleterious | N | 0.500951834 | None | None | N |
E/H | 0.3344 | likely_benign | 0.3203 | benign | 0.177 | Stabilizing | 0.996 | D | 0.702 | prob.delet. | None | None | None | None | N |
E/I | 0.171 | likely_benign | 0.1671 | benign | 0.136 | Stabilizing | 0.02 | N | 0.725 | deleterious | None | None | None | None | N |
E/K | 0.0888 | likely_benign | 0.0913 | benign | 0.309 | Stabilizing | 0.007 | N | 0.428 | neutral | N | 0.503490707 | None | None | N |
E/L | 0.2081 | likely_benign | 0.1991 | benign | 0.136 | Stabilizing | 0.329 | N | 0.786 | deleterious | None | None | None | None | N |
E/M | 0.2577 | likely_benign | 0.2551 | benign | 0.108 | Stabilizing | 0.974 | D | 0.77 | deleterious | None | None | None | None | N |
E/N | 0.1648 | likely_benign | 0.1578 | benign | 0.091 | Stabilizing | 0.587 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/P | 0.208 | likely_benign | 0.2054 | benign | 0.022 | Stabilizing | 0.953 | D | 0.8 | deleterious | None | None | None | None | N |
E/Q | 0.101 | likely_benign | 0.0998 | benign | 0.11 | Stabilizing | 0.883 | D | 0.699 | prob.delet. | N | 0.474607561 | None | None | N |
E/R | 0.1712 | likely_benign | 0.172 | benign | 0.552 | Stabilizing | 0.833 | D | 0.761 | deleterious | None | None | None | None | N |
E/S | 0.1272 | likely_benign | 0.121 | benign | -0.094 | Destabilizing | 0.74 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/T | 0.1369 | likely_benign | 0.1324 | benign | 0.042 | Stabilizing | 0.74 | D | 0.793 | deleterious | None | None | None | None | N |
E/V | 0.1138 | likely_benign | 0.1111 | benign | 0.022 | Stabilizing | 0.27 | N | 0.756 | deleterious | N | 0.477899243 | None | None | N |
E/W | 0.8001 | likely_pathogenic | 0.7942 | pathogenic | -0.09 | Destabilizing | 0.996 | D | 0.818 | deleterious | None | None | None | None | N |
E/Y | 0.4271 | ambiguous | 0.414 | ambiguous | 0.031 | Stabilizing | 0.953 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.