Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24902 | 74929;74930;74931 | chr2:178571428;178571427;178571426 | chr2:179436155;179436154;179436153 |
N2AB | 23261 | 70006;70007;70008 | chr2:178571428;178571427;178571426 | chr2:179436155;179436154;179436153 |
N2A | 22334 | 67225;67226;67227 | chr2:178571428;178571427;178571426 | chr2:179436155;179436154;179436153 |
N2B | 15837 | 47734;47735;47736 | chr2:178571428;178571427;178571426 | chr2:179436155;179436154;179436153 |
Novex-1 | 15962 | 48109;48110;48111 | chr2:178571428;178571427;178571426 | chr2:179436155;179436154;179436153 |
Novex-2 | 16029 | 48310;48311;48312 | chr2:178571428;178571427;178571426 | chr2:179436155;179436154;179436153 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.125 | N | 0.402 | 0.206 | 0.359763055319 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6135 | likely_pathogenic | 0.6179 | pathogenic | -1.801 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
A/D | 0.9984 | likely_pathogenic | 0.998 | pathogenic | -2.763 | Highly Destabilizing | 0.998 | D | 0.877 | deleterious | N | 0.516184895 | None | None | N |
A/E | 0.995 | likely_pathogenic | 0.9932 | pathogenic | -2.679 | Highly Destabilizing | 0.995 | D | 0.833 | deleterious | None | None | None | None | N |
A/F | 0.9503 | likely_pathogenic | 0.9393 | pathogenic | -1.053 | Destabilizing | 0.995 | D | 0.87 | deleterious | None | None | None | None | N |
A/G | 0.7425 | likely_pathogenic | 0.705 | pathogenic | -1.481 | Destabilizing | 0.976 | D | 0.685 | prob.delet. | N | 0.515424427 | None | None | N |
A/H | 0.9968 | likely_pathogenic | 0.9956 | pathogenic | -1.56 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
A/I | 0.4256 | ambiguous | 0.4449 | ambiguous | -0.339 | Destabilizing | 0.929 | D | 0.759 | deleterious | None | None | None | None | N |
A/K | 0.9981 | likely_pathogenic | 0.9972 | pathogenic | -1.364 | Destabilizing | 0.995 | D | 0.833 | deleterious | None | None | None | None | N |
A/L | 0.5401 | ambiguous | 0.5088 | ambiguous | -0.339 | Destabilizing | 0.929 | D | 0.633 | neutral | None | None | None | None | N |
A/M | 0.8069 | likely_pathogenic | 0.7858 | pathogenic | -0.689 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
A/N | 0.9884 | likely_pathogenic | 0.9855 | pathogenic | -1.59 | Destabilizing | 0.998 | D | 0.873 | deleterious | None | None | None | None | N |
A/P | 0.8899 | likely_pathogenic | 0.7903 | pathogenic | -0.571 | Destabilizing | 0.998 | D | 0.835 | deleterious | N | 0.492711816 | None | None | N |
A/Q | 0.9884 | likely_pathogenic | 0.9831 | pathogenic | -1.654 | Destabilizing | 0.998 | D | 0.811 | deleterious | None | None | None | None | N |
A/R | 0.9908 | likely_pathogenic | 0.9874 | pathogenic | -1.157 | Destabilizing | 0.995 | D | 0.839 | deleterious | None | None | None | None | N |
A/S | 0.4786 | ambiguous | 0.4581 | ambiguous | -1.898 | Destabilizing | 0.976 | D | 0.747 | deleterious | N | 0.514663958 | None | None | N |
A/T | 0.5901 | likely_pathogenic | 0.5858 | pathogenic | -1.717 | Destabilizing | 0.952 | D | 0.742 | deleterious | N | 0.467579668 | None | None | N |
A/V | 0.1937 | likely_benign | 0.2229 | benign | -0.571 | Destabilizing | 0.125 | N | 0.402 | neutral | N | 0.506296151 | None | None | N |
A/W | 0.9978 | likely_pathogenic | 0.9966 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
A/Y | 0.9909 | likely_pathogenic | 0.9872 | pathogenic | -1.099 | Destabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.