Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24911 | 74956;74957;74958 | chr2:178571401;178571400;178571399 | chr2:179436128;179436127;179436126 |
N2AB | 23270 | 70033;70034;70035 | chr2:178571401;178571400;178571399 | chr2:179436128;179436127;179436126 |
N2A | 22343 | 67252;67253;67254 | chr2:178571401;178571400;178571399 | chr2:179436128;179436127;179436126 |
N2B | 15846 | 47761;47762;47763 | chr2:178571401;178571400;178571399 | chr2:179436128;179436127;179436126 |
Novex-1 | 15971 | 48136;48137;48138 | chr2:178571401;178571400;178571399 | chr2:179436128;179436127;179436126 |
Novex-2 | 16038 | 48337;48338;48339 | chr2:178571401;178571400;178571399 | chr2:179436128;179436127;179436126 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs750688079 | -0.658 | 0.999 | N | 0.755 | 0.439 | 0.74914240937 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs750688079 | -0.658 | 0.999 | N | 0.755 | 0.439 | 0.74914240937 | gnomAD-4.0.0 | 2.05305E-06 | None | None | None | None | I | None | 2.98989E-05 | 4.47287E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | None | None | 0.905 | N | 0.423 | 0.199 | 0.374434639691 | gnomAD-4.0.0 | 1.59204E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85948E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0997 | likely_benign | 0.0929 | benign | -1.316 | Destabilizing | 0.992 | D | 0.687 | prob.neutral | N | 0.464777603 | None | None | I |
P/C | 0.5491 | ambiguous | 0.4904 | ambiguous | -1.098 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
P/D | 0.8991 | likely_pathogenic | 0.8678 | pathogenic | -1.132 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | I |
P/E | 0.6025 | likely_pathogenic | 0.5445 | ambiguous | -1.17 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/F | 0.6733 | likely_pathogenic | 0.6062 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/G | 0.6433 | likely_pathogenic | 0.5897 | pathogenic | -1.569 | Destabilizing | 0.997 | D | 0.725 | prob.delet. | None | None | None | None | I |
P/H | 0.4815 | ambiguous | 0.4222 | ambiguous | -1.057 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.532953386 | None | None | I |
P/I | 0.3868 | ambiguous | 0.3313 | benign | -0.741 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
P/K | 0.6725 | likely_pathogenic | 0.6191 | pathogenic | -0.889 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
P/L | 0.2444 | likely_benign | 0.2097 | benign | -0.741 | Destabilizing | 0.999 | D | 0.755 | deleterious | N | 0.514595641 | None | None | I |
P/M | 0.4132 | ambiguous | 0.3558 | ambiguous | -0.649 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
P/N | 0.6907 | likely_pathogenic | 0.6314 | pathogenic | -0.688 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | I |
P/Q | 0.3287 | likely_benign | 0.297 | benign | -0.95 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
P/R | 0.5357 | ambiguous | 0.4889 | ambiguous | -0.393 | Destabilizing | 0.999 | D | 0.819 | deleterious | N | 0.508555254 | None | None | I |
P/S | 0.243 | likely_benign | 0.2121 | benign | -1.207 | Destabilizing | 0.905 | D | 0.423 | neutral | N | 0.519540381 | None | None | I |
P/T | 0.2486 | likely_benign | 0.2184 | benign | -1.142 | Destabilizing | 0.992 | D | 0.707 | prob.neutral | N | 0.482817676 | None | None | I |
P/V | 0.2905 | likely_benign | 0.2521 | benign | -0.899 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
P/W | 0.8848 | likely_pathogenic | 0.851 | pathogenic | -1.301 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
P/Y | 0.7064 | likely_pathogenic | 0.6473 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.