Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24916 | 74971;74972;74973 | chr2:178571386;178571385;178571384 | chr2:179436113;179436112;179436111 |
N2AB | 23275 | 70048;70049;70050 | chr2:178571386;178571385;178571384 | chr2:179436113;179436112;179436111 |
N2A | 22348 | 67267;67268;67269 | chr2:178571386;178571385;178571384 | chr2:179436113;179436112;179436111 |
N2B | 15851 | 47776;47777;47778 | chr2:178571386;178571385;178571384 | chr2:179436113;179436112;179436111 |
Novex-1 | 15976 | 48151;48152;48153 | chr2:178571386;178571385;178571384 | chr2:179436113;179436112;179436111 |
Novex-2 | 16043 | 48352;48353;48354 | chr2:178571386;178571385;178571384 | chr2:179436113;179436112;179436111 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs764600357 | -0.308 | None | N | 0.115 | 0.068 | 0.139678290688 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
V/I | rs764600357 | -0.308 | None | N | 0.115 | 0.068 | 0.139678290688 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0993 | likely_benign | 0.0972 | benign | -1.296 | Destabilizing | None | N | 0.126 | neutral | N | 0.455950263 | None | None | N |
V/C | 0.3149 | likely_benign | 0.3026 | benign | -0.92 | Destabilizing | 0.628 | D | 0.487 | neutral | None | None | None | None | N |
V/D | 0.2322 | likely_benign | 0.2212 | benign | -1.024 | Destabilizing | 0.106 | N | 0.589 | neutral | N | 0.494911296 | None | None | N |
V/E | 0.1761 | likely_benign | 0.1692 | benign | -0.965 | Destabilizing | 0.136 | N | 0.504 | neutral | None | None | None | None | N |
V/F | 0.0567 | likely_benign | 0.0538 | benign | -0.826 | Destabilizing | None | N | 0.163 | neutral | N | 0.431497322 | None | None | N |
V/G | 0.152 | likely_benign | 0.1494 | benign | -1.666 | Destabilizing | 0.029 | N | 0.435 | neutral | N | 0.489697477 | None | None | N |
V/H | 0.1831 | likely_benign | 0.1834 | benign | -1.18 | Destabilizing | 0.214 | N | 0.501 | neutral | None | None | None | None | N |
V/I | 0.0645 | likely_benign | 0.0655 | benign | -0.365 | Destabilizing | None | N | 0.115 | neutral | N | 0.475056099 | None | None | N |
V/K | 0.1689 | likely_benign | 0.1726 | benign | -1.08 | Destabilizing | 0.072 | N | 0.502 | neutral | None | None | None | None | N |
V/L | 0.0892 | likely_benign | 0.0976 | benign | -0.365 | Destabilizing | None | N | 0.085 | neutral | N | 0.462030873 | None | None | N |
V/M | 0.0821 | likely_benign | 0.0849 | benign | -0.362 | Destabilizing | 0.007 | N | 0.286 | neutral | None | None | None | None | N |
V/N | 0.1322 | likely_benign | 0.1366 | benign | -1.038 | Destabilizing | 0.356 | N | 0.577 | neutral | None | None | None | None | N |
V/P | 0.795 | likely_pathogenic | 0.7982 | pathogenic | -0.64 | Destabilizing | 0.356 | N | 0.604 | neutral | None | None | None | None | N |
V/Q | 0.1307 | likely_benign | 0.132 | benign | -1.09 | Destabilizing | 0.356 | N | 0.599 | neutral | None | None | None | None | N |
V/R | 0.1324 | likely_benign | 0.1301 | benign | -0.688 | Destabilizing | 0.356 | N | 0.583 | neutral | None | None | None | None | N |
V/S | 0.1 | likely_benign | 0.0952 | benign | -1.614 | Destabilizing | 0.016 | N | 0.414 | neutral | None | None | None | None | N |
V/T | 0.0954 | likely_benign | 0.0953 | benign | -1.428 | Destabilizing | 0.031 | N | 0.277 | neutral | None | None | None | None | N |
V/W | 0.3174 | likely_benign | 0.3188 | benign | -1.095 | Destabilizing | 0.356 | N | 0.493 | neutral | None | None | None | None | N |
V/Y | 0.1645 | likely_benign | 0.16 | benign | -0.742 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.