Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24920 | 74983;74984;74985 | chr2:178571374;178571373;178571372 | chr2:179436101;179436100;179436099 |
N2AB | 23279 | 70060;70061;70062 | chr2:178571374;178571373;178571372 | chr2:179436101;179436100;179436099 |
N2A | 22352 | 67279;67280;67281 | chr2:178571374;178571373;178571372 | chr2:179436101;179436100;179436099 |
N2B | 15855 | 47788;47789;47790 | chr2:178571374;178571373;178571372 | chr2:179436101;179436100;179436099 |
Novex-1 | 15980 | 48163;48164;48165 | chr2:178571374;178571373;178571372 | chr2:179436101;179436100;179436099 |
Novex-2 | 16047 | 48364;48365;48366 | chr2:178571374;178571373;178571372 | chr2:179436101;179436100;179436099 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | None | N | 0.227 | 0.075 | 0.252162846088 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0595 | likely_benign | 0.0548 | benign | -0.628 | Destabilizing | None | N | 0.036 | neutral | N | 0.40353993 | None | None | N |
S/C | 0.0575 | likely_benign | 0.0594 | benign | -0.702 | Destabilizing | None | N | 0.227 | neutral | N | 0.471458433 | None | None | N |
S/D | 0.5807 | likely_pathogenic | 0.5558 | ambiguous | -1.335 | Destabilizing | None | N | 0.094 | neutral | None | None | None | None | N |
S/E | 0.5896 | likely_pathogenic | 0.553 | ambiguous | -1.335 | Destabilizing | 0.009 | N | 0.241 | neutral | None | None | None | None | N |
S/F | 0.1499 | likely_benign | 0.1576 | benign | -1.124 | Destabilizing | None | N | 0.259 | neutral | N | 0.470111639 | None | None | N |
S/G | 0.1017 | likely_benign | 0.0993 | benign | -0.829 | Destabilizing | 0.009 | N | 0.244 | neutral | None | None | None | None | N |
S/H | 0.3025 | likely_benign | 0.3009 | benign | -1.499 | Destabilizing | 0.245 | N | 0.311 | neutral | None | None | None | None | N |
S/I | 0.0862 | likely_benign | 0.089 | benign | -0.199 | Destabilizing | 0.009 | N | 0.295 | neutral | None | None | None | None | N |
S/K | 0.5993 | likely_pathogenic | 0.5869 | pathogenic | -0.725 | Destabilizing | 0.018 | N | 0.257 | neutral | None | None | None | None | N |
S/L | 0.0791 | likely_benign | 0.0788 | benign | -0.199 | Destabilizing | 0.004 | N | 0.289 | neutral | None | None | None | None | N |
S/M | 0.1497 | likely_benign | 0.1594 | benign | 0.194 | Stabilizing | 0.245 | N | 0.326 | neutral | None | None | None | None | N |
S/N | 0.1804 | likely_benign | 0.183 | benign | -0.914 | Destabilizing | 0.022 | N | 0.269 | neutral | None | None | None | None | N |
S/P | 0.2414 | likely_benign | 0.1866 | benign | -0.312 | Destabilizing | 0.033 | N | 0.391 | neutral | N | 0.482520789 | None | None | N |
S/Q | 0.4257 | ambiguous | 0.4202 | ambiguous | -1.181 | Destabilizing | 0.085 | N | 0.329 | neutral | None | None | None | None | N |
S/R | 0.4611 | ambiguous | 0.4518 | ambiguous | -0.577 | Destabilizing | 0.044 | N | 0.429 | neutral | None | None | None | None | N |
S/T | 0.0748 | likely_benign | 0.0763 | benign | -0.765 | Destabilizing | None | N | 0.082 | neutral | N | 0.442962323 | None | None | N |
S/V | 0.0868 | likely_benign | 0.0873 | benign | -0.312 | Destabilizing | None | N | 0.139 | neutral | None | None | None | None | N |
S/W | 0.3113 | likely_benign | 0.3178 | benign | -1.191 | Destabilizing | 0.55 | D | 0.41 | neutral | None | None | None | None | N |
S/Y | 0.151 | likely_benign | 0.15 | benign | -0.836 | Destabilizing | 0.017 | N | 0.465 | neutral | N | 0.503512136 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.