Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24927 | 75004;75005;75006 | chr2:178571353;178571352;178571351 | chr2:179436080;179436079;179436078 |
N2AB | 23286 | 70081;70082;70083 | chr2:178571353;178571352;178571351 | chr2:179436080;179436079;179436078 |
N2A | 22359 | 67300;67301;67302 | chr2:178571353;178571352;178571351 | chr2:179436080;179436079;179436078 |
N2B | 15862 | 47809;47810;47811 | chr2:178571353;178571352;178571351 | chr2:179436080;179436079;179436078 |
Novex-1 | 15987 | 48184;48185;48186 | chr2:178571353;178571352;178571351 | chr2:179436080;179436079;179436078 |
Novex-2 | 16054 | 48385;48386;48387 | chr2:178571353;178571352;178571351 | chr2:179436080;179436079;179436078 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1468819805 | -0.304 | 0.63 | N | 0.682 | 0.156 | 0.307332253619 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/L | rs1468819805 | -0.304 | 0.63 | N | 0.682 | 0.156 | 0.307332253619 | gnomAD-4.0.0 | 6.84347E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99611E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.807 | likely_pathogenic | 0.8219 | pathogenic | -2.424 | Highly Destabilizing | 0.892 | D | 0.679 | prob.neutral | N | 0.513443552 | None | None | N |
V/C | 0.9309 | likely_pathogenic | 0.9399 | pathogenic | -1.93 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/D | 0.9974 | likely_pathogenic | 0.9971 | pathogenic | -3.515 | Highly Destabilizing | 0.987 | D | 0.856 | deleterious | None | None | None | None | N |
V/E | 0.9911 | likely_pathogenic | 0.9897 | pathogenic | -3.188 | Highly Destabilizing | 0.967 | D | 0.808 | deleterious | D | 0.525813816 | None | None | N |
V/F | 0.7449 | likely_pathogenic | 0.7878 | pathogenic | -1.367 | Destabilizing | 0.987 | D | 0.696 | prob.neutral | None | None | None | None | N |
V/G | 0.8846 | likely_pathogenic | 0.8889 | pathogenic | -3.039 | Highly Destabilizing | 0.967 | D | 0.815 | deleterious | D | 0.525813816 | None | None | N |
V/H | 0.9974 | likely_pathogenic | 0.9975 | pathogenic | -2.965 | Highly Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
V/I | 0.0749 | likely_benign | 0.0762 | benign | -0.628 | Destabilizing | 0.099 | N | 0.295 | neutral | N | 0.43640171 | None | None | N |
V/K | 0.9945 | likely_pathogenic | 0.9935 | pathogenic | -2.065 | Highly Destabilizing | 0.975 | D | 0.808 | deleterious | None | None | None | None | N |
V/L | 0.341 | ambiguous | 0.3709 | ambiguous | -0.628 | Destabilizing | 0.63 | D | 0.682 | prob.neutral | N | 0.410321469 | None | None | N |
V/M | 0.5146 | ambiguous | 0.5667 | pathogenic | -0.935 | Destabilizing | 0.987 | D | 0.657 | neutral | None | None | None | None | N |
V/N | 0.9903 | likely_pathogenic | 0.9899 | pathogenic | -2.789 | Highly Destabilizing | 0.987 | D | 0.855 | deleterious | None | None | None | None | N |
V/P | 0.9931 | likely_pathogenic | 0.9921 | pathogenic | -1.21 | Destabilizing | 0.073 | N | 0.681 | prob.neutral | None | None | None | None | N |
V/Q | 0.9909 | likely_pathogenic | 0.9908 | pathogenic | -2.414 | Highly Destabilizing | 0.987 | D | 0.832 | deleterious | None | None | None | None | N |
V/R | 0.9911 | likely_pathogenic | 0.9902 | pathogenic | -2.154 | Highly Destabilizing | 0.987 | D | 0.863 | deleterious | None | None | None | None | N |
V/S | 0.9648 | likely_pathogenic | 0.968 | pathogenic | -3.276 | Highly Destabilizing | 0.975 | D | 0.777 | deleterious | None | None | None | None | N |
V/T | 0.9015 | likely_pathogenic | 0.9061 | pathogenic | -2.789 | Highly Destabilizing | 0.916 | D | 0.653 | neutral | None | None | None | None | N |
V/W | 0.9951 | likely_pathogenic | 0.9959 | pathogenic | -1.97 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
V/Y | 0.9767 | likely_pathogenic | 0.9798 | pathogenic | -1.653 | Destabilizing | 0.996 | D | 0.69 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.