Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24931 | 75016;75017;75018 | chr2:178571341;178571340;178571339 | chr2:179436068;179436067;179436066 |
N2AB | 23290 | 70093;70094;70095 | chr2:178571341;178571340;178571339 | chr2:179436068;179436067;179436066 |
N2A | 22363 | 67312;67313;67314 | chr2:178571341;178571340;178571339 | chr2:179436068;179436067;179436066 |
N2B | 15866 | 47821;47822;47823 | chr2:178571341;178571340;178571339 | chr2:179436068;179436067;179436066 |
Novex-1 | 15991 | 48196;48197;48198 | chr2:178571341;178571340;178571339 | chr2:179436068;179436067;179436066 |
Novex-2 | 16058 | 48397;48398;48399 | chr2:178571341;178571340;178571339 | chr2:179436068;179436067;179436066 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1314632891 | -0.815 | 0.472 | N | 0.475 | 0.059 | 0.183819452728 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1314632891 | -0.815 | 0.472 | N | 0.475 | 0.059 | 0.183819452728 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1314632891 | -0.815 | 0.472 | N | 0.475 | 0.059 | 0.183819452728 | gnomAD-4.0.0 | 1.31532E-05 | None | None | None | None | I | None | 4.82742E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs369679134 | 0.018 | 0.012 | N | 0.147 | 0.205 | None | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.14E-05 | None | 0 | None | 0 | 1.57E-05 | 0 |
E/K | rs369679134 | 0.018 | 0.012 | N | 0.147 | 0.205 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 2.88351E-04 | 1.94024E-04 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs369679134 | 0.018 | 0.012 | N | 0.147 | 0.205 | None | gnomAD-4.0.0 | 1.36366E-05 | None | None | None | None | I | None | 0 | 0 | None | 6.7595E-05 | 2.23174E-05 | None | 0 | 0 | 1.52595E-05 | 0 | 1.60174E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1567 | likely_benign | 0.1487 | benign | -0.241 | Destabilizing | 0.309 | N | 0.412 | neutral | N | 0.424952565 | None | None | I |
E/C | 0.8481 | likely_pathogenic | 0.8299 | pathogenic | -0.298 | Destabilizing | 0.996 | D | 0.601 | neutral | None | None | None | None | I |
E/D | 0.247 | likely_benign | 0.259 | benign | -0.756 | Destabilizing | 0.472 | N | 0.475 | neutral | N | 0.515614642 | None | None | I |
E/F | 0.8191 | likely_pathogenic | 0.801 | pathogenic | 0.333 | Stabilizing | 0.984 | D | 0.588 | neutral | None | None | None | None | I |
E/G | 0.3157 | likely_benign | 0.3157 | benign | -0.541 | Destabilizing | 0.003 | N | 0.362 | neutral | N | 0.496508806 | None | None | I |
E/H | 0.6067 | likely_pathogenic | 0.5843 | pathogenic | 0.568 | Stabilizing | 0.984 | D | 0.555 | neutral | None | None | None | None | I |
E/I | 0.2694 | likely_benign | 0.2487 | benign | 0.551 | Stabilizing | 0.91 | D | 0.602 | neutral | None | None | None | None | I |
E/K | 0.1379 | likely_benign | 0.132 | benign | 0.137 | Stabilizing | 0.012 | N | 0.147 | neutral | N | 0.439788732 | None | None | I |
E/L | 0.3767 | ambiguous | 0.3617 | ambiguous | 0.551 | Stabilizing | 0.742 | D | 0.559 | neutral | None | None | None | None | I |
E/M | 0.4211 | ambiguous | 0.3918 | ambiguous | 0.478 | Stabilizing | 0.996 | D | 0.574 | neutral | None | None | None | None | I |
E/N | 0.4323 | ambiguous | 0.4429 | ambiguous | -0.475 | Destabilizing | 0.742 | D | 0.491 | neutral | None | None | None | None | I |
E/P | 0.3594 | ambiguous | 0.3183 | benign | 0.309 | Stabilizing | 0.984 | D | 0.592 | neutral | None | None | None | None | I |
E/Q | 0.1617 | likely_benign | 0.1516 | benign | -0.331 | Destabilizing | 0.684 | D | 0.496 | neutral | N | 0.484657017 | None | None | I |
E/R | 0.2751 | likely_benign | 0.2496 | benign | 0.523 | Stabilizing | 0.59 | D | 0.481 | neutral | None | None | None | None | I |
E/S | 0.3015 | likely_benign | 0.2911 | benign | -0.656 | Destabilizing | 0.373 | N | 0.488 | neutral | None | None | None | None | I |
E/T | 0.2643 | likely_benign | 0.2589 | benign | -0.387 | Destabilizing | 0.037 | N | 0.275 | neutral | None | None | None | None | I |
E/V | 0.1702 | likely_benign | 0.1618 | benign | 0.309 | Stabilizing | 0.684 | D | 0.549 | neutral | N | 0.480443276 | None | None | I |
E/W | 0.9567 | likely_pathogenic | 0.9494 | pathogenic | 0.562 | Stabilizing | 0.996 | D | 0.619 | neutral | None | None | None | None | I |
E/Y | 0.7141 | likely_pathogenic | 0.6964 | pathogenic | 0.614 | Stabilizing | 0.984 | D | 0.586 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.