Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24940 | 75043;75044;75045 | chr2:178571314;178571313;178571312 | chr2:179436041;179436040;179436039 |
N2AB | 23299 | 70120;70121;70122 | chr2:178571314;178571313;178571312 | chr2:179436041;179436040;179436039 |
N2A | 22372 | 67339;67340;67341 | chr2:178571314;178571313;178571312 | chr2:179436041;179436040;179436039 |
N2B | 15875 | 47848;47849;47850 | chr2:178571314;178571313;178571312 | chr2:179436041;179436040;179436039 |
Novex-1 | 16000 | 48223;48224;48225 | chr2:178571314;178571313;178571312 | chr2:179436041;179436040;179436039 |
Novex-2 | 16067 | 48424;48425;48426 | chr2:178571314;178571313;178571312 | chr2:179436041;179436040;179436039 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.296 | N | 0.667 | 0.358 | 0.59385865776 | gnomAD-4.0.0 | 6.84322E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99596E-07 | 0 | 0 |
V/D | rs754897261 | -1.773 | 0.879 | N | 0.812 | 0.468 | 0.803159424316 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.28788E-04 | None | 0 | 0 | 0 |
V/D | rs754897261 | -1.773 | 0.879 | N | 0.812 | 0.468 | 0.803159424316 | gnomAD-4.0.0 | 1.09492E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.85503E-04 | 0 |
V/I | None | None | 0.001 | N | 0.249 | 0.071 | 0.245660935333 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8649 | likely_pathogenic | 0.8685 | pathogenic | -1.82 | Destabilizing | 0.296 | N | 0.667 | neutral | N | 0.498186453 | None | None | I |
V/C | 0.9244 | likely_pathogenic | 0.9304 | pathogenic | -1.146 | Destabilizing | 0.991 | D | 0.713 | prob.delet. | None | None | None | None | I |
V/D | 0.9759 | likely_pathogenic | 0.9838 | pathogenic | -1.906 | Destabilizing | 0.879 | D | 0.812 | deleterious | N | 0.492653045 | None | None | I |
V/E | 0.9553 | likely_pathogenic | 0.9641 | pathogenic | -1.828 | Destabilizing | 0.906 | D | 0.778 | deleterious | None | None | None | None | I |
V/F | 0.7911 | likely_pathogenic | 0.7988 | pathogenic | -1.276 | Destabilizing | 0.782 | D | 0.773 | deleterious | N | 0.502741903 | None | None | I |
V/G | 0.8579 | likely_pathogenic | 0.8806 | pathogenic | -2.228 | Highly Destabilizing | 0.879 | D | 0.805 | deleterious | N | 0.517304666 | None | None | I |
V/H | 0.981 | likely_pathogenic | 0.986 | pathogenic | -1.85 | Destabilizing | 0.991 | D | 0.783 | deleterious | None | None | None | None | I |
V/I | 0.068 | likely_benign | 0.066 | benign | -0.755 | Destabilizing | 0.001 | N | 0.249 | neutral | N | 0.366402907 | None | None | I |
V/K | 0.9639 | likely_pathogenic | 0.9709 | pathogenic | -1.528 | Destabilizing | 0.906 | D | 0.779 | deleterious | None | None | None | None | I |
V/L | 0.4093 | ambiguous | 0.3968 | ambiguous | -0.755 | Destabilizing | 0.031 | N | 0.5 | neutral | N | 0.499837113 | None | None | I |
V/M | 0.5421 | ambiguous | 0.5583 | ambiguous | -0.524 | Destabilizing | 0.826 | D | 0.675 | prob.neutral | None | None | None | None | I |
V/N | 0.8375 | likely_pathogenic | 0.8988 | pathogenic | -1.439 | Destabilizing | 0.967 | D | 0.815 | deleterious | None | None | None | None | I |
V/P | 0.8328 | likely_pathogenic | 0.8462 | pathogenic | -1.078 | Destabilizing | 0.967 | D | 0.754 | deleterious | None | None | None | None | I |
V/Q | 0.9606 | likely_pathogenic | 0.9673 | pathogenic | -1.51 | Destabilizing | 0.967 | D | 0.761 | deleterious | None | None | None | None | I |
V/R | 0.9532 | likely_pathogenic | 0.9614 | pathogenic | -1.082 | Destabilizing | 0.906 | D | 0.815 | deleterious | None | None | None | None | I |
V/S | 0.9033 | likely_pathogenic | 0.9216 | pathogenic | -2.004 | Highly Destabilizing | 0.906 | D | 0.761 | deleterious | None | None | None | None | I |
V/T | 0.8356 | likely_pathogenic | 0.8507 | pathogenic | -1.808 | Destabilizing | 0.575 | D | 0.73 | prob.delet. | None | None | None | None | I |
V/W | 0.9906 | likely_pathogenic | 0.9912 | pathogenic | -1.611 | Destabilizing | 0.991 | D | 0.766 | deleterious | None | None | None | None | I |
V/Y | 0.9563 | likely_pathogenic | 0.961 | pathogenic | -1.29 | Destabilizing | 0.906 | D | 0.743 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.