Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2494775064;75065;75066 chr2:178571293;178571292;178571291chr2:179436020;179436019;179436018
N2AB2330670141;70142;70143 chr2:178571293;178571292;178571291chr2:179436020;179436019;179436018
N2A2237967360;67361;67362 chr2:178571293;178571292;178571291chr2:179436020;179436019;179436018
N2B1588247869;47870;47871 chr2:178571293;178571292;178571291chr2:179436020;179436019;179436018
Novex-11600748244;48245;48246 chr2:178571293;178571292;178571291chr2:179436020;179436019;179436018
Novex-21607448445;48446;48447 chr2:178571293;178571292;178571291chr2:179436020;179436019;179436018
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Fn3-69
  • Domain position: 40
  • Structural Position: 42
  • Q(SASA): 0.1197
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs744426 -1.929 0.999 D 0.749 0.301 None gnomAD-2.1.1 1.71489E-01 None None None None N None 7.1464E-02 1.45197E-01 None 1.66828E-01 4.28829E-01 None 2.52124E-01 None 1.51604E-01 1.44201E-01 1.58982E-01
R/C rs744426 -1.929 0.999 D 0.749 0.301 None gnomAD-3.1.2 1.40561E-01 None None None None N None 7.52914E-02 1.26759E-01 4.66887E-01 1.68108E-01 4.39719E-01 None 1.6125E-01 1.13924E-01 1.44401E-01 2.54273E-01 1.25359E-01
R/C rs744426 -1.929 0.999 D 0.749 0.301 None 1000 genomes 2.08067E-01 None None None None N None 6.66E-02 1.455E-01 None None 4.504E-01 1.372E-01 None None None 2.669E-01 None
R/C rs744426 -1.929 0.999 D 0.749 0.301 None gnomAD-4.0.0 1.52119E-01 None None None None N None 7.33413E-02 1.40069E-01 None 1.6625E-01 4.33831E-01 None 1.52941E-01 1.26032E-01 1.38545E-01 2.49808E-01 1.60641E-01
R/H rs765512476 -2.088 0.998 N 0.651 0.28 0.359963025489 gnomAD-2.1.1 3.93E-05 None None None None N None 0 0 None 0 1.02891E-04 None 0 None 4E-05 5.49E-05 1.40528E-04
R/H rs765512476 -2.088 0.998 N 0.651 0.28 0.359963025489 gnomAD-3.1.2 1.97E-05 None None None None N None 0 0 0 0 0 None 9.43E-05 0 2.94E-05 0 0
R/H rs765512476 -2.088 0.998 N 0.651 0.28 0.359963025489 gnomAD-4.0.0 7.43763E-06 None None None None N None 0 0 None 0 4.46528E-05 None 3.1251E-05 0 6.78207E-06 0 0
R/S None None 0.055 N 0.379 0.177 0.231873229951 gnomAD-4.0.0 6.84331E-07 None None None None N None 0 0 None 0 0 None 0 0 8.99601E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.61 likely_pathogenic 0.6339 pathogenic -2.208 Highly Destabilizing 0.525 D 0.497 neutral None None None None N
R/C 0.1484 likely_benign 0.1443 benign -2.058 Highly Destabilizing 0.999 D 0.749 deleterious D 0.522537827 None None N
R/D 0.9616 likely_pathogenic 0.9585 pathogenic -1.425 Destabilizing 0.842 D 0.654 neutral None None None None N
R/E 0.6602 likely_pathogenic 0.6638 pathogenic -1.168 Destabilizing 0.842 D 0.567 neutral None None None None N
R/F 0.6668 likely_pathogenic 0.7065 pathogenic -1.239 Destabilizing 0.949 D 0.733 prob.delet. None None None None N
R/G 0.5002 ambiguous 0.5101 ambiguous -2.585 Highly Destabilizing 0.837 D 0.644 neutral N 0.480496591 None None N
R/H 0.181 likely_benign 0.1727 benign -1.781 Destabilizing 0.998 D 0.651 neutral N 0.509995391 None None N
R/I 0.4497 ambiguous 0.4957 ambiguous -1.09 Destabilizing 0.728 D 0.698 prob.neutral None None None None N
R/K 0.1235 likely_benign 0.1317 benign -1.097 Destabilizing 0.688 D 0.515 neutral None None None None N
R/L 0.4184 ambiguous 0.4556 ambiguous -1.09 Destabilizing 0.013 N 0.554 neutral N 0.467984515 None None N
R/M 0.3138 likely_benign 0.3513 ambiguous -1.548 Destabilizing 0.949 D 0.692 prob.neutral None None None None N
R/N 0.856 likely_pathogenic 0.8583 pathogenic -1.687 Destabilizing 0.842 D 0.595 neutral None None None None N
R/P 0.9931 likely_pathogenic 0.9933 pathogenic -1.455 Destabilizing 0.986 D 0.71 prob.delet. N 0.503627275 None None N
R/Q 0.1151 likely_benign 0.1198 benign -1.505 Destabilizing 0.915 D 0.63 neutral None None None None N
R/S 0.6846 likely_pathogenic 0.7013 pathogenic -2.603 Highly Destabilizing 0.055 N 0.379 neutral N 0.517094722 None None N
R/T 0.5207 ambiguous 0.5392 ambiguous -2.107 Highly Destabilizing 0.525 D 0.568 neutral None None None None N
R/V 0.5053 ambiguous 0.5493 ambiguous -1.455 Destabilizing 0.728 D 0.671 neutral None None None None N
R/W 0.2635 likely_benign 0.2863 benign -0.657 Destabilizing 0.998 D 0.755 deleterious None None None None N
R/Y 0.4295 ambiguous 0.4605 ambiguous -0.623 Destabilizing 0.991 D 0.699 prob.neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.