Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24947 | 75064;75065;75066 | chr2:178571293;178571292;178571291 | chr2:179436020;179436019;179436018 |
N2AB | 23306 | 70141;70142;70143 | chr2:178571293;178571292;178571291 | chr2:179436020;179436019;179436018 |
N2A | 22379 | 67360;67361;67362 | chr2:178571293;178571292;178571291 | chr2:179436020;179436019;179436018 |
N2B | 15882 | 47869;47870;47871 | chr2:178571293;178571292;178571291 | chr2:179436020;179436019;179436018 |
Novex-1 | 16007 | 48244;48245;48246 | chr2:178571293;178571292;178571291 | chr2:179436020;179436019;179436018 |
Novex-2 | 16074 | 48445;48446;48447 | chr2:178571293;178571292;178571291 | chr2:179436020;179436019;179436018 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs744426 | -1.929 | 0.999 | D | 0.749 | 0.301 | None | gnomAD-2.1.1 | 1.71489E-01 | None | None | None | None | N | None | 7.1464E-02 | 1.45197E-01 | None | 1.66828E-01 | 4.28829E-01 | None | 2.52124E-01 | None | 1.51604E-01 | 1.44201E-01 | 1.58982E-01 |
R/C | rs744426 | -1.929 | 0.999 | D | 0.749 | 0.301 | None | gnomAD-3.1.2 | 1.40561E-01 | None | None | None | None | N | None | 7.52914E-02 | 1.26759E-01 | 4.66887E-01 | 1.68108E-01 | 4.39719E-01 | None | 1.6125E-01 | 1.13924E-01 | 1.44401E-01 | 2.54273E-01 | 1.25359E-01 |
R/C | rs744426 | -1.929 | 0.999 | D | 0.749 | 0.301 | None | 1000 genomes | 2.08067E-01 | None | None | None | None | N | None | 6.66E-02 | 1.455E-01 | None | None | 4.504E-01 | 1.372E-01 | None | None | None | 2.669E-01 | None |
R/C | rs744426 | -1.929 | 0.999 | D | 0.749 | 0.301 | None | gnomAD-4.0.0 | 1.52119E-01 | None | None | None | None | N | None | 7.33413E-02 | 1.40069E-01 | None | 1.6625E-01 | 4.33831E-01 | None | 1.52941E-01 | 1.26032E-01 | 1.38545E-01 | 2.49808E-01 | 1.60641E-01 |
R/H | rs765512476 | -2.088 | 0.998 | N | 0.651 | 0.28 | 0.359963025489 | gnomAD-2.1.1 | 3.93E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.02891E-04 | None | 0 | None | 4E-05 | 5.49E-05 | 1.40528E-04 |
R/H | rs765512476 | -2.088 | 0.998 | N | 0.651 | 0.28 | 0.359963025489 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 2.94E-05 | 0 | 0 |
R/H | rs765512476 | -2.088 | 0.998 | N | 0.651 | 0.28 | 0.359963025489 | gnomAD-4.0.0 | 7.43763E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.46528E-05 | None | 3.1251E-05 | 0 | 6.78207E-06 | 0 | 0 |
R/S | None | None | 0.055 | N | 0.379 | 0.177 | 0.231873229951 | gnomAD-4.0.0 | 6.84331E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99601E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.61 | likely_pathogenic | 0.6339 | pathogenic | -2.208 | Highly Destabilizing | 0.525 | D | 0.497 | neutral | None | None | None | None | N |
R/C | 0.1484 | likely_benign | 0.1443 | benign | -2.058 | Highly Destabilizing | 0.999 | D | 0.749 | deleterious | D | 0.522537827 | None | None | N |
R/D | 0.9616 | likely_pathogenic | 0.9585 | pathogenic | -1.425 | Destabilizing | 0.842 | D | 0.654 | neutral | None | None | None | None | N |
R/E | 0.6602 | likely_pathogenic | 0.6638 | pathogenic | -1.168 | Destabilizing | 0.842 | D | 0.567 | neutral | None | None | None | None | N |
R/F | 0.6668 | likely_pathogenic | 0.7065 | pathogenic | -1.239 | Destabilizing | 0.949 | D | 0.733 | prob.delet. | None | None | None | None | N |
R/G | 0.5002 | ambiguous | 0.5101 | ambiguous | -2.585 | Highly Destabilizing | 0.837 | D | 0.644 | neutral | N | 0.480496591 | None | None | N |
R/H | 0.181 | likely_benign | 0.1727 | benign | -1.781 | Destabilizing | 0.998 | D | 0.651 | neutral | N | 0.509995391 | None | None | N |
R/I | 0.4497 | ambiguous | 0.4957 | ambiguous | -1.09 | Destabilizing | 0.728 | D | 0.698 | prob.neutral | None | None | None | None | N |
R/K | 0.1235 | likely_benign | 0.1317 | benign | -1.097 | Destabilizing | 0.688 | D | 0.515 | neutral | None | None | None | None | N |
R/L | 0.4184 | ambiguous | 0.4556 | ambiguous | -1.09 | Destabilizing | 0.013 | N | 0.554 | neutral | N | 0.467984515 | None | None | N |
R/M | 0.3138 | likely_benign | 0.3513 | ambiguous | -1.548 | Destabilizing | 0.949 | D | 0.692 | prob.neutral | None | None | None | None | N |
R/N | 0.856 | likely_pathogenic | 0.8583 | pathogenic | -1.687 | Destabilizing | 0.842 | D | 0.595 | neutral | None | None | None | None | N |
R/P | 0.9931 | likely_pathogenic | 0.9933 | pathogenic | -1.455 | Destabilizing | 0.986 | D | 0.71 | prob.delet. | N | 0.503627275 | None | None | N |
R/Q | 0.1151 | likely_benign | 0.1198 | benign | -1.505 | Destabilizing | 0.915 | D | 0.63 | neutral | None | None | None | None | N |
R/S | 0.6846 | likely_pathogenic | 0.7013 | pathogenic | -2.603 | Highly Destabilizing | 0.055 | N | 0.379 | neutral | N | 0.517094722 | None | None | N |
R/T | 0.5207 | ambiguous | 0.5392 | ambiguous | -2.107 | Highly Destabilizing | 0.525 | D | 0.568 | neutral | None | None | None | None | N |
R/V | 0.5053 | ambiguous | 0.5493 | ambiguous | -1.455 | Destabilizing | 0.728 | D | 0.671 | neutral | None | None | None | None | N |
R/W | 0.2635 | likely_benign | 0.2863 | benign | -0.657 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
R/Y | 0.4295 | ambiguous | 0.4605 | ambiguous | -0.623 | Destabilizing | 0.991 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.