Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24949 | 75070;75071;75072 | chr2:178571287;178571286;178571285 | chr2:179436014;179436013;179436012 |
N2AB | 23308 | 70147;70148;70149 | chr2:178571287;178571286;178571285 | chr2:179436014;179436013;179436012 |
N2A | 22381 | 67366;67367;67368 | chr2:178571287;178571286;178571285 | chr2:179436014;179436013;179436012 |
N2B | 15884 | 47875;47876;47877 | chr2:178571287;178571286;178571285 | chr2:179436014;179436013;179436012 |
Novex-1 | 16009 | 48250;48251;48252 | chr2:178571287;178571286;178571285 | chr2:179436014;179436013;179436012 |
Novex-2 | 16076 | 48451;48452;48453 | chr2:178571287;178571286;178571285 | chr2:179436014;179436013;179436012 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1179463518 | -1.295 | 0.993 | N | 0.664 | 0.555 | 0.461671691612 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66058E-04 |
E/G | rs1179463518 | -1.295 | 0.993 | N | 0.664 | 0.555 | 0.461671691612 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
E/Q | rs753903335 | -0.765 | 0.997 | N | 0.635 | 0.31 | 0.368369118721 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs753903335 | -0.765 | 0.997 | N | 0.635 | 0.31 | 0.368369118721 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs753903335 | -0.765 | 0.997 | N | 0.635 | 0.31 | 0.368369118721 | gnomAD-4.0.0 | 6.57903E-06 | None | None | None | None | N | None | 2.41581E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6086 | likely_pathogenic | 0.6491 | pathogenic | -0.927 | Destabilizing | 0.977 | D | 0.617 | neutral | N | 0.485905095 | None | None | N |
E/C | 0.9793 | likely_pathogenic | 0.9816 | pathogenic | -0.515 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/D | 0.2436 | likely_benign | 0.295 | benign | -1.329 | Destabilizing | 0.117 | N | 0.205 | neutral | N | 0.470074353 | None | None | N |
E/F | 0.9785 | likely_pathogenic | 0.9834 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/G | 0.5916 | likely_pathogenic | 0.6364 | pathogenic | -1.35 | Destabilizing | 0.993 | D | 0.664 | neutral | N | 0.489058647 | None | None | N |
E/H | 0.9377 | likely_pathogenic | 0.9431 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
E/I | 0.8827 | likely_pathogenic | 0.9032 | pathogenic | 0.251 | Stabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
E/K | 0.7869 | likely_pathogenic | 0.8007 | pathogenic | -0.879 | Destabilizing | 0.977 | D | 0.529 | neutral | N | 0.513747773 | None | None | N |
E/L | 0.8437 | likely_pathogenic | 0.872 | pathogenic | 0.251 | Stabilizing | 0.998 | D | 0.772 | deleterious | None | None | None | None | N |
E/M | 0.8764 | likely_pathogenic | 0.8935 | pathogenic | 0.828 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/N | 0.7368 | likely_pathogenic | 0.7777 | pathogenic | -1.351 | Destabilizing | 0.99 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/P | 0.8806 | likely_pathogenic | 0.8843 | pathogenic | -0.12 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
E/Q | 0.534 | ambiguous | 0.5367 | ambiguous | -1.151 | Destabilizing | 0.997 | D | 0.635 | neutral | N | 0.477876471 | None | None | N |
E/R | 0.8636 | likely_pathogenic | 0.8698 | pathogenic | -0.635 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/S | 0.7039 | likely_pathogenic | 0.7504 | pathogenic | -1.788 | Destabilizing | 0.983 | D | 0.582 | neutral | None | None | None | None | N |
E/T | 0.8355 | likely_pathogenic | 0.8619 | pathogenic | -1.426 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/V | 0.7421 | likely_pathogenic | 0.7797 | pathogenic | -0.12 | Destabilizing | 0.997 | D | 0.745 | deleterious | N | 0.487906558 | None | None | N |
E/W | 0.9922 | likely_pathogenic | 0.9935 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/Y | 0.9601 | likely_pathogenic | 0.968 | pathogenic | -0.069 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.