Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24951 | 75076;75077;75078 | chr2:178571281;178571280;178571279 | chr2:179436008;179436007;179436006 |
N2AB | 23310 | 70153;70154;70155 | chr2:178571281;178571280;178571279 | chr2:179436008;179436007;179436006 |
N2A | 22383 | 67372;67373;67374 | chr2:178571281;178571280;178571279 | chr2:179436008;179436007;179436006 |
N2B | 15886 | 47881;47882;47883 | chr2:178571281;178571280;178571279 | chr2:179436008;179436007;179436006 |
Novex-1 | 16011 | 48256;48257;48258 | chr2:178571281;178571280;178571279 | chr2:179436008;179436007;179436006 |
Novex-2 | 16078 | 48457;48458;48459 | chr2:178571281;178571280;178571279 | chr2:179436008;179436007;179436006 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.919 | N | 0.521 | 0.286 | 0.186928172975 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6275 | likely_pathogenic | 0.6069 | pathogenic | -0.143 | Destabilizing | 0.938 | D | 0.528 | neutral | None | None | None | None | I |
N/C | 0.6238 | likely_pathogenic | 0.6209 | pathogenic | 0.145 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
N/D | 0.4801 | ambiguous | 0.485 | ambiguous | 0.019 | Stabilizing | 0.958 | D | 0.547 | neutral | N | 0.463743027 | None | None | I |
N/E | 0.8428 | likely_pathogenic | 0.8423 | pathogenic | -0.048 | Destabilizing | 0.968 | D | 0.508 | neutral | None | None | None | None | I |
N/F | 0.8688 | likely_pathogenic | 0.8767 | pathogenic | -0.739 | Destabilizing | 0.995 | D | 0.66 | neutral | None | None | None | None | I |
N/G | 0.4763 | ambiguous | 0.4554 | ambiguous | -0.23 | Destabilizing | 0.968 | D | 0.525 | neutral | None | None | None | None | I |
N/H | 0.2927 | likely_benign | 0.2977 | benign | -0.243 | Destabilizing | 0.998 | D | 0.605 | neutral | N | 0.487034412 | None | None | I |
N/I | 0.709 | likely_pathogenic | 0.7023 | pathogenic | -0.014 | Destabilizing | 0.988 | D | 0.653 | neutral | N | 0.487287901 | None | None | I |
N/K | 0.7372 | likely_pathogenic | 0.7723 | pathogenic | 0.112 | Stabilizing | 0.958 | D | 0.507 | neutral | N | 0.499050466 | None | None | I |
N/L | 0.5839 | likely_pathogenic | 0.5831 | pathogenic | -0.014 | Destabilizing | 0.982 | D | 0.579 | neutral | None | None | None | None | I |
N/M | 0.6783 | likely_pathogenic | 0.6844 | pathogenic | 0.124 | Stabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | I |
N/P | 0.8796 | likely_pathogenic | 0.8594 | pathogenic | -0.035 | Destabilizing | 0.995 | D | 0.591 | neutral | None | None | None | None | I |
N/Q | 0.7298 | likely_pathogenic | 0.7348 | pathogenic | -0.325 | Destabilizing | 0.995 | D | 0.576 | neutral | None | None | None | None | I |
N/R | 0.7729 | likely_pathogenic | 0.7931 | pathogenic | 0.197 | Stabilizing | 0.991 | D | 0.585 | neutral | None | None | None | None | I |
N/S | 0.1654 | likely_benign | 0.1563 | benign | -0.068 | Destabilizing | 0.919 | D | 0.521 | neutral | N | 0.475634889 | None | None | I |
N/T | 0.351 | ambiguous | 0.337 | benign | -0.024 | Destabilizing | 0.067 | N | 0.443 | neutral | N | 0.519521739 | None | None | I |
N/V | 0.701 | likely_pathogenic | 0.6983 | pathogenic | -0.035 | Destabilizing | 0.982 | D | 0.611 | neutral | None | None | None | None | I |
N/W | 0.9473 | likely_pathogenic | 0.949 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
N/Y | 0.4343 | ambiguous | 0.4615 | ambiguous | -0.537 | Destabilizing | 0.998 | D | 0.611 | neutral | N | 0.494035851 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.