Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24956 | 75091;75092;75093 | chr2:178571266;178571265;178571264 | chr2:179435993;179435992;179435991 |
N2AB | 23315 | 70168;70169;70170 | chr2:178571266;178571265;178571264 | chr2:179435993;179435992;179435991 |
N2A | 22388 | 67387;67388;67389 | chr2:178571266;178571265;178571264 | chr2:179435993;179435992;179435991 |
N2B | 15891 | 47896;47897;47898 | chr2:178571266;178571265;178571264 | chr2:179435993;179435992;179435991 |
Novex-1 | 16016 | 48271;48272;48273 | chr2:178571266;178571265;178571264 | chr2:179435993;179435992;179435991 |
Novex-2 | 16083 | 48472;48473;48474 | chr2:178571266;178571265;178571264 | chr2:179435993;179435992;179435991 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs375784858 | -0.155 | None | N | 0.161 | 0.068 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs375784858 | -0.155 | None | N | 0.161 | 0.068 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1881 | likely_benign | 0.2384 | benign | -1.017 | Destabilizing | None | N | 0.167 | neutral | N | 0.501106549 | None | None | N |
V/C | 0.583 | likely_pathogenic | 0.6324 | pathogenic | -0.731 | Destabilizing | 0.935 | D | 0.386 | neutral | None | None | None | None | N |
V/D | 0.4664 | ambiguous | 0.5119 | ambiguous | -0.62 | Destabilizing | 0.317 | N | 0.444 | neutral | N | 0.506917801 | None | None | N |
V/E | 0.3309 | likely_benign | 0.356 | ambiguous | -0.609 | Destabilizing | 0.38 | N | 0.413 | neutral | None | None | None | None | N |
V/F | 0.1769 | likely_benign | 0.2081 | benign | -0.644 | Destabilizing | 0.188 | N | 0.417 | neutral | N | 0.513459771 | None | None | N |
V/G | 0.2053 | likely_benign | 0.2397 | benign | -1.313 | Destabilizing | 0.062 | N | 0.372 | neutral | N | 0.472560553 | None | None | N |
V/H | 0.5019 | ambiguous | 0.5481 | ambiguous | -0.71 | Destabilizing | 0.935 | D | 0.445 | neutral | None | None | None | None | N |
V/I | 0.0777 | likely_benign | 0.0792 | benign | -0.315 | Destabilizing | None | N | 0.161 | neutral | N | 0.47936584 | None | None | N |
V/K | 0.4186 | ambiguous | 0.4311 | ambiguous | -0.888 | Destabilizing | 0.38 | N | 0.411 | neutral | None | None | None | None | N |
V/L | 0.1545 | likely_benign | 0.1745 | benign | -0.315 | Destabilizing | None | N | 0.199 | neutral | N | 0.495892731 | None | None | N |
V/M | 0.1104 | likely_benign | 0.1193 | benign | -0.38 | Destabilizing | 0.235 | N | 0.461 | neutral | None | None | None | None | N |
V/N | 0.1916 | likely_benign | 0.2406 | benign | -0.779 | Destabilizing | 0.38 | N | 0.459 | neutral | None | None | None | None | N |
V/P | 0.9158 | likely_pathogenic | 0.9363 | pathogenic | -0.514 | Destabilizing | 0.555 | D | 0.445 | neutral | None | None | None | None | N |
V/Q | 0.2675 | likely_benign | 0.289 | benign | -0.884 | Destabilizing | 0.555 | D | 0.421 | neutral | None | None | None | None | N |
V/R | 0.4172 | ambiguous | 0.4297 | ambiguous | -0.425 | Destabilizing | 0.555 | D | 0.447 | neutral | None | None | None | None | N |
V/S | 0.1764 | likely_benign | 0.229 | benign | -1.293 | Destabilizing | 0.016 | N | 0.309 | neutral | None | None | None | None | N |
V/T | 0.1501 | likely_benign | 0.1883 | benign | -1.169 | Destabilizing | 0.081 | N | 0.328 | neutral | None | None | None | None | N |
V/W | 0.8134 | likely_pathogenic | 0.8262 | pathogenic | -0.844 | Destabilizing | 0.935 | D | 0.55 | neutral | None | None | None | None | N |
V/Y | 0.4745 | ambiguous | 0.5006 | ambiguous | -0.525 | Destabilizing | 0.555 | D | 0.41 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.