Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24958 | 75097;75098;75099 | chr2:178571260;178571259;178571258 | chr2:179435987;179435986;179435985 |
N2AB | 23317 | 70174;70175;70176 | chr2:178571260;178571259;178571258 | chr2:179435987;179435986;179435985 |
N2A | 22390 | 67393;67394;67395 | chr2:178571260;178571259;178571258 | chr2:179435987;179435986;179435985 |
N2B | 15893 | 47902;47903;47904 | chr2:178571260;178571259;178571258 | chr2:179435987;179435986;179435985 |
Novex-1 | 16018 | 48277;48278;48279 | chr2:178571260;178571259;178571258 | chr2:179435987;179435986;179435985 |
Novex-2 | 16085 | 48478;48479;48480 | chr2:178571260;178571259;178571258 | chr2:179435987;179435986;179435985 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.684 | N | 0.525 | 0.235 | 0.602613489494 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | N | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2723 | likely_benign | 0.2922 | benign | -1.84 | Destabilizing | 0.373 | N | 0.457 | neutral | None | None | None | None | N |
L/C | 0.4187 | ambiguous | 0.4351 | ambiguous | -1.145 | Destabilizing | 0.996 | D | 0.517 | neutral | None | None | None | None | N |
L/D | 0.8587 | likely_pathogenic | 0.8728 | pathogenic | -1.229 | Destabilizing | 0.91 | D | 0.594 | neutral | None | None | None | None | N |
L/E | 0.5148 | ambiguous | 0.5516 | ambiguous | -1.099 | Destabilizing | 0.59 | D | 0.545 | neutral | None | None | None | None | N |
L/F | 0.3093 | likely_benign | 0.3246 | benign | -1.017 | Destabilizing | 0.884 | D | 0.501 | neutral | N | 0.512168905 | None | None | N |
L/G | 0.6604 | likely_pathogenic | 0.6837 | pathogenic | -2.282 | Highly Destabilizing | 0.91 | D | 0.59 | neutral | None | None | None | None | N |
L/H | 0.4899 | ambiguous | 0.4956 | ambiguous | -1.408 | Destabilizing | 0.987 | D | 0.617 | neutral | None | None | None | None | N |
L/I | 0.0806 | likely_benign | 0.0858 | benign | -0.634 | Destabilizing | 0.037 | N | 0.309 | neutral | None | None | None | None | N |
L/K | 0.659 | likely_pathogenic | 0.671 | pathogenic | -1.276 | Destabilizing | 0.59 | D | 0.523 | neutral | None | None | None | None | N |
L/M | 0.1046 | likely_benign | 0.1091 | benign | -0.574 | Destabilizing | 0.939 | D | 0.524 | neutral | N | 0.521521894 | None | None | N |
L/N | 0.5408 | ambiguous | 0.5739 | pathogenic | -1.373 | Destabilizing | 0.91 | D | 0.609 | neutral | None | None | None | None | N |
L/P | 0.8649 | likely_pathogenic | 0.8712 | pathogenic | -1.009 | Destabilizing | 0.953 | D | 0.613 | neutral | None | None | None | None | N |
L/Q | 0.2551 | likely_benign | 0.2785 | benign | -1.344 | Destabilizing | 0.016 | N | 0.324 | neutral | None | None | None | None | N |
L/R | 0.5776 | likely_pathogenic | 0.5904 | pathogenic | -0.889 | Destabilizing | 0.835 | D | 0.583 | neutral | None | None | None | None | N |
L/S | 0.4258 | ambiguous | 0.4741 | ambiguous | -2.1 | Highly Destabilizing | 0.684 | D | 0.525 | neutral | N | 0.46693824 | None | None | N |
L/T | 0.2915 | likely_benign | 0.3198 | benign | -1.826 | Destabilizing | 0.742 | D | 0.437 | neutral | None | None | None | None | N |
L/V | 0.085 | likely_benign | 0.0891 | benign | -1.009 | Destabilizing | 0.007 | N | 0.23 | neutral | N | 0.437095143 | None | None | N |
L/W | 0.492 | ambiguous | 0.4998 | ambiguous | -1.2 | Destabilizing | 0.994 | D | 0.621 | neutral | N | 0.511099695 | None | None | N |
L/Y | 0.5345 | ambiguous | 0.5368 | ambiguous | -0.922 | Destabilizing | 0.953 | D | 0.521 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.