Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24961 | 75106;75107;75108 | chr2:178571251;178571250;178571249 | chr2:179435978;179435977;179435976 |
N2AB | 23320 | 70183;70184;70185 | chr2:178571251;178571250;178571249 | chr2:179435978;179435977;179435976 |
N2A | 22393 | 67402;67403;67404 | chr2:178571251;178571250;178571249 | chr2:179435978;179435977;179435976 |
N2B | 15896 | 47911;47912;47913 | chr2:178571251;178571250;178571249 | chr2:179435978;179435977;179435976 |
Novex-1 | 16021 | 48286;48287;48288 | chr2:178571251;178571250;178571249 | chr2:179435978;179435977;179435976 |
Novex-2 | 16088 | 48487;48488;48489 | chr2:178571251;178571250;178571249 | chr2:179435978;179435977;179435976 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.966 | N | 0.308 | 0.233 | 0.370424759081 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0826 | likely_benign | 0.0815 | benign | -0.212 | Destabilizing | 0.454 | N | 0.273 | neutral | N | 0.513899701 | None | None | I |
T/C | 0.2886 | likely_benign | 0.2969 | benign | -0.208 | Destabilizing | 0.998 | D | 0.284 | neutral | None | None | None | None | I |
T/D | 0.3987 | ambiguous | 0.3752 | ambiguous | 0.014 | Stabilizing | 0.842 | D | 0.321 | neutral | None | None | None | None | I |
T/E | 0.3282 | likely_benign | 0.3247 | benign | -0.065 | Destabilizing | 0.525 | D | 0.328 | neutral | None | None | None | None | I |
T/F | 0.1609 | likely_benign | 0.1633 | benign | -0.711 | Destabilizing | 0.991 | D | 0.355 | neutral | None | None | None | None | I |
T/G | 0.1969 | likely_benign | 0.1909 | benign | -0.33 | Destabilizing | 0.728 | D | 0.349 | neutral | None | None | None | None | I |
T/H | 0.24 | likely_benign | 0.2267 | benign | -0.525 | Destabilizing | 0.974 | D | 0.334 | neutral | None | None | None | None | I |
T/I | 0.0924 | likely_benign | 0.0943 | benign | -0.02 | Destabilizing | 0.966 | D | 0.308 | neutral | N | 0.484827588 | None | None | I |
T/K | 0.2923 | likely_benign | 0.275 | benign | -0.354 | Destabilizing | 0.669 | D | 0.323 | neutral | N | 0.520577744 | None | None | I |
T/L | 0.0693 | likely_benign | 0.0721 | benign | -0.02 | Destabilizing | 0.842 | D | 0.331 | neutral | None | None | None | None | I |
T/M | 0.0668 | likely_benign | 0.0669 | benign | None | Stabilizing | 0.991 | D | 0.265 | neutral | None | None | None | None | I |
T/N | 0.0915 | likely_benign | 0.0891 | benign | -0.079 | Destabilizing | 0.842 | D | 0.267 | neutral | None | None | None | None | I |
T/P | 0.3437 | ambiguous | 0.3258 | benign | -0.056 | Destabilizing | 0.966 | D | 0.296 | neutral | N | 0.476243857 | None | None | I |
T/Q | 0.2239 | likely_benign | 0.2176 | benign | -0.302 | Destabilizing | 0.172 | N | 0.255 | neutral | None | None | None | None | I |
T/R | 0.2857 | likely_benign | 0.2649 | benign | -0.031 | Destabilizing | 0.801 | D | 0.318 | neutral | N | 0.468633306 | None | None | I |
T/S | 0.0934 | likely_benign | 0.0935 | benign | -0.248 | Destabilizing | 0.022 | N | 0.116 | neutral | N | 0.467071334 | None | None | I |
T/V | 0.0829 | likely_benign | 0.0855 | benign | -0.056 | Destabilizing | 0.842 | D | 0.271 | neutral | None | None | None | None | I |
T/W | 0.5395 | ambiguous | 0.5166 | ambiguous | -0.768 | Destabilizing | 0.998 | D | 0.417 | neutral | None | None | None | None | I |
T/Y | 0.2006 | likely_benign | 0.1906 | benign | -0.474 | Destabilizing | 0.991 | D | 0.361 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.