Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24962 | 75109;75110;75111 | chr2:178571248;178571247;178571246 | chr2:179435975;179435974;179435973 |
N2AB | 23321 | 70186;70187;70188 | chr2:178571248;178571247;178571246 | chr2:179435975;179435974;179435973 |
N2A | 22394 | 67405;67406;67407 | chr2:178571248;178571247;178571246 | chr2:179435975;179435974;179435973 |
N2B | 15897 | 47914;47915;47916 | chr2:178571248;178571247;178571246 | chr2:179435975;179435974;179435973 |
Novex-1 | 16022 | 48289;48290;48291 | chr2:178571248;178571247;178571246 | chr2:179435975;179435974;179435973 |
Novex-2 | 16089 | 48490;48491;48492 | chr2:178571248;178571247;178571246 | chr2:179435975;179435974;179435973 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.891 | N | 0.379 | 0.172 | 0.251116650651 | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85935E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0722 | likely_benign | 0.0706 | benign | -1.339 | Destabilizing | 0.625 | D | 0.352 | neutral | D | 0.52579435 | None | None | N |
P/C | 0.3042 | likely_benign | 0.3228 | benign | -0.639 | Destabilizing | 0.998 | D | 0.438 | neutral | None | None | None | None | N |
P/D | 0.7382 | likely_pathogenic | 0.7313 | pathogenic | -1.464 | Destabilizing | 0.991 | D | 0.391 | neutral | None | None | None | None | N |
P/E | 0.4724 | ambiguous | 0.4579 | ambiguous | -1.517 | Destabilizing | 0.971 | D | 0.386 | neutral | None | None | None | None | N |
P/F | 0.4668 | ambiguous | 0.4931 | ambiguous | -1.205 | Destabilizing | 0.949 | D | 0.444 | neutral | None | None | None | None | N |
P/G | 0.3689 | ambiguous | 0.3919 | ambiguous | -1.603 | Destabilizing | 0.971 | D | 0.361 | neutral | None | None | None | None | N |
P/H | 0.3205 | likely_benign | 0.3086 | benign | -1.265 | Destabilizing | 0.997 | D | 0.391 | neutral | N | 0.478413585 | None | None | N |
P/I | 0.1299 | likely_benign | 0.1255 | benign | -0.729 | Destabilizing | 0.007 | N | 0.332 | neutral | None | None | None | None | N |
P/K | 0.4184 | ambiguous | 0.4093 | ambiguous | -1.166 | Destabilizing | 0.915 | D | 0.349 | neutral | None | None | None | None | N |
P/L | 0.0697 | likely_benign | 0.0754 | benign | -0.729 | Destabilizing | 0.005 | N | 0.333 | neutral | N | 0.443698615 | None | None | N |
P/M | 0.1814 | likely_benign | 0.1875 | benign | -0.356 | Destabilizing | 0.949 | D | 0.421 | neutral | None | None | None | None | N |
P/N | 0.4146 | ambiguous | 0.412 | ambiguous | -0.801 | Destabilizing | 0.991 | D | 0.425 | neutral | None | None | None | None | N |
P/Q | 0.2402 | likely_benign | 0.2338 | benign | -1.054 | Destabilizing | 0.991 | D | 0.399 | neutral | None | None | None | None | N |
P/R | 0.301 | likely_benign | 0.2857 | benign | -0.565 | Destabilizing | 0.966 | D | 0.427 | neutral | N | 0.521369965 | None | None | N |
P/S | 0.1668 | likely_benign | 0.166 | benign | -1.185 | Destabilizing | 0.891 | D | 0.379 | neutral | N | 0.491833705 | None | None | N |
P/T | 0.1023 | likely_benign | 0.1006 | benign | -1.148 | Destabilizing | 0.801 | D | 0.344 | neutral | N | 0.473904092 | None | None | N |
P/V | 0.0968 | likely_benign | 0.0936 | benign | -0.898 | Destabilizing | 0.029 | N | 0.274 | neutral | None | None | None | None | N |
P/W | 0.6603 | likely_pathogenic | 0.6893 | pathogenic | -1.386 | Destabilizing | 0.998 | D | 0.527 | neutral | None | None | None | None | N |
P/Y | 0.4728 | ambiguous | 0.4858 | ambiguous | -1.129 | Destabilizing | 0.974 | D | 0.469 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.