Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24963 | 75112;75113;75114 | chr2:178571245;178571244;178571243 | chr2:179435972;179435971;179435970 |
N2AB | 23322 | 70189;70190;70191 | chr2:178571245;178571244;178571243 | chr2:179435972;179435971;179435970 |
N2A | 22395 | 67408;67409;67410 | chr2:178571245;178571244;178571243 | chr2:179435972;179435971;179435970 |
N2B | 15898 | 47917;47918;47919 | chr2:178571245;178571244;178571243 | chr2:179435972;179435971;179435970 |
Novex-1 | 16023 | 48292;48293;48294 | chr2:178571245;178571244;178571243 | chr2:179435972;179435971;179435970 |
Novex-2 | 16090 | 48493;48494;48495 | chr2:178571245;178571244;178571243 | chr2:179435972;179435971;179435970 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs769512290 | -1.19 | 0.58 | N | 0.427 | 0.047 | 0.367803931526 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 1.15949E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs769512290 | -1.19 | 0.58 | N | 0.427 | 0.047 | 0.367803931526 | gnomAD-4.0.0 | 7.95912E-06 | None | None | None | None | N | None | 0 | 1.14354E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8482 | likely_pathogenic | 0.8597 | pathogenic | -2.345 | Highly Destabilizing | 0.953 | D | 0.537 | neutral | None | None | None | None | N |
I/C | 0.8484 | likely_pathogenic | 0.862 | pathogenic | -1.387 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
I/D | 0.9883 | likely_pathogenic | 0.9889 | pathogenic | -2.832 | Highly Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
I/E | 0.975 | likely_pathogenic | 0.9757 | pathogenic | -2.574 | Highly Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
I/F | 0.5998 | likely_pathogenic | 0.6294 | pathogenic | -1.379 | Destabilizing | 0.982 | D | 0.674 | neutral | N | 0.492991759 | None | None | N |
I/G | 0.9714 | likely_pathogenic | 0.9758 | pathogenic | -2.905 | Highly Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
I/H | 0.9561 | likely_pathogenic | 0.9572 | pathogenic | -2.54 | Highly Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
I/K | 0.9568 | likely_pathogenic | 0.9568 | pathogenic | -1.65 | Destabilizing | 0.993 | D | 0.787 | deleterious | None | None | None | None | N |
I/L | 0.1612 | likely_benign | 0.1787 | benign | -0.707 | Destabilizing | 0.02 | N | 0.255 | neutral | N | 0.51211019 | None | None | N |
I/M | 0.2712 | likely_benign | 0.2813 | benign | -0.617 | Destabilizing | 0.982 | D | 0.677 | prob.neutral | N | 0.499739708 | None | None | N |
I/N | 0.8487 | likely_pathogenic | 0.8517 | pathogenic | -2.081 | Highly Destabilizing | 0.997 | D | 0.8 | deleterious | N | 0.487734612 | None | None | N |
I/P | 0.9787 | likely_pathogenic | 0.98 | pathogenic | -1.238 | Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
I/Q | 0.9435 | likely_pathogenic | 0.9439 | pathogenic | -1.878 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
I/R | 0.9403 | likely_pathogenic | 0.94 | pathogenic | -1.538 | Destabilizing | 0.993 | D | 0.8 | deleterious | None | None | None | None | N |
I/S | 0.8453 | likely_pathogenic | 0.8442 | pathogenic | -2.711 | Highly Destabilizing | 0.991 | D | 0.697 | prob.neutral | N | 0.505317503 | None | None | N |
I/T | 0.8669 | likely_pathogenic | 0.8701 | pathogenic | -2.308 | Highly Destabilizing | 0.991 | D | 0.689 | prob.neutral | N | 0.46754367 | None | None | N |
I/V | 0.1111 | likely_benign | 0.1109 | benign | -1.238 | Destabilizing | 0.58 | D | 0.427 | neutral | N | 0.469340848 | None | None | N |
I/W | 0.981 | likely_pathogenic | 0.9839 | pathogenic | -1.871 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
I/Y | 0.9258 | likely_pathogenic | 0.9378 | pathogenic | -1.532 | Destabilizing | 0.993 | D | 0.698 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.