Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24966 | 75121;75122;75123 | chr2:178571236;178571235;178571234 | chr2:179435963;179435962;179435961 |
N2AB | 23325 | 70198;70199;70200 | chr2:178571236;178571235;178571234 | chr2:179435963;179435962;179435961 |
N2A | 22398 | 67417;67418;67419 | chr2:178571236;178571235;178571234 | chr2:179435963;179435962;179435961 |
N2B | 15901 | 47926;47927;47928 | chr2:178571236;178571235;178571234 | chr2:179435963;179435962;179435961 |
Novex-1 | 16026 | 48301;48302;48303 | chr2:178571236;178571235;178571234 | chr2:179435963;179435962;179435961 |
Novex-2 | 16093 | 48502;48503;48504 | chr2:178571236;178571235;178571234 | chr2:179435963;179435962;179435961 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.204 | N | 0.385 | 0.25 | 0.239305524855 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1272 | likely_benign | 0.1223 | benign | -0.86 | Destabilizing | 0.892 | D | 0.453 | neutral | N | 0.473334249 | None | None | N |
T/C | 0.2787 | likely_benign | 0.2687 | benign | -0.537 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
T/D | 0.5671 | likely_pathogenic | 0.5642 | pathogenic | -0.989 | Destabilizing | 0.95 | D | 0.581 | neutral | None | None | None | None | N |
T/E | 0.4558 | ambiguous | 0.4382 | ambiguous | -0.821 | Destabilizing | 0.975 | D | 0.579 | neutral | None | None | None | None | N |
T/F | 0.494 | ambiguous | 0.4771 | ambiguous | -0.57 | Destabilizing | 0.975 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/G | 0.2525 | likely_benign | 0.2432 | benign | -1.257 | Destabilizing | 0.916 | D | 0.583 | neutral | None | None | None | None | N |
T/H | 0.3521 | ambiguous | 0.3387 | benign | -1.356 | Destabilizing | 0.997 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/I | 0.3302 | likely_benign | 0.3128 | benign | 0.167 | Stabilizing | 0.935 | D | 0.587 | neutral | N | 0.507834465 | None | None | N |
T/K | 0.177 | likely_benign | 0.1669 | benign | -0.532 | Destabilizing | 0.975 | D | 0.582 | neutral | None | None | None | None | N |
T/L | 0.0876 | likely_benign | 0.08 | benign | 0.167 | Stabilizing | 0.033 | N | 0.373 | neutral | None | None | None | None | N |
T/M | 0.0955 | likely_benign | 0.0902 | benign | 0.104 | Stabilizing | 0.993 | D | 0.657 | neutral | None | None | None | None | N |
T/N | 0.1018 | likely_benign | 0.1066 | benign | -1.072 | Destabilizing | 0.204 | N | 0.385 | neutral | N | 0.484650874 | None | None | N |
T/P | 0.1434 | likely_benign | 0.1479 | benign | -0.143 | Destabilizing | 0.994 | D | 0.637 | neutral | N | 0.487234995 | None | None | N |
T/Q | 0.2272 | likely_benign | 0.2101 | benign | -0.871 | Destabilizing | 0.987 | D | 0.655 | neutral | None | None | None | None | N |
T/R | 0.1393 | likely_benign | 0.1347 | benign | -0.654 | Destabilizing | 0.987 | D | 0.637 | neutral | None | None | None | None | N |
T/S | 0.1747 | likely_benign | 0.1669 | benign | -1.309 | Destabilizing | 0.892 | D | 0.457 | neutral | N | 0.490171056 | None | None | N |
T/V | 0.1991 | likely_benign | 0.1856 | benign | -0.143 | Destabilizing | 0.845 | D | 0.438 | neutral | None | None | None | None | N |
T/W | 0.7458 | likely_pathogenic | 0.7255 | pathogenic | -0.752 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
T/Y | 0.423 | ambiguous | 0.4054 | ambiguous | -0.366 | Destabilizing | 0.987 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.