Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24970 | 75133;75134;75135 | chr2:178571224;178571223;178571222 | chr2:179435951;179435950;179435949 |
N2AB | 23329 | 70210;70211;70212 | chr2:178571224;178571223;178571222 | chr2:179435951;179435950;179435949 |
N2A | 22402 | 67429;67430;67431 | chr2:178571224;178571223;178571222 | chr2:179435951;179435950;179435949 |
N2B | 15905 | 47938;47939;47940 | chr2:178571224;178571223;178571222 | chr2:179435951;179435950;179435949 |
Novex-1 | 16030 | 48313;48314;48315 | chr2:178571224;178571223;178571222 | chr2:179435951;179435950;179435949 |
Novex-2 | 16097 | 48514;48515;48516 | chr2:178571224;178571223;178571222 | chr2:179435951;179435950;179435949 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs779917922 | 0.64 | 0.016 | N | 0.515 | 0.156 | 0.176091768786 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0824 | likely_benign | 0.0803 | benign | -0.973 | Destabilizing | 0.002 | N | 0.223 | neutral | N | 0.418162666 | None | None | N |
T/C | 0.3563 | ambiguous | 0.327 | benign | -0.561 | Destabilizing | 0.92 | D | 0.781 | deleterious | None | None | None | None | N |
T/D | 0.7664 | likely_pathogenic | 0.7661 | pathogenic | -0.853 | Destabilizing | 0.92 | D | 0.769 | deleterious | None | None | None | None | N |
T/E | 0.7255 | likely_pathogenic | 0.7281 | pathogenic | -0.62 | Destabilizing | 0.617 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/F | 0.4963 | ambiguous | 0.4793 | ambiguous | -0.81 | Destabilizing | 0.85 | D | 0.805 | deleterious | None | None | None | None | N |
T/G | 0.3478 | ambiguous | 0.3197 | benign | -1.41 | Destabilizing | 0.447 | N | 0.742 | deleterious | None | None | None | None | N |
T/H | 0.6787 | likely_pathogenic | 0.6516 | pathogenic | -1.44 | Destabilizing | 0.992 | D | 0.816 | deleterious | None | None | None | None | N |
T/I | 0.2207 | likely_benign | 0.2135 | benign | 0.181 | Stabilizing | 0.016 | N | 0.515 | neutral | N | 0.382737796 | None | None | N |
T/K | 0.8148 | likely_pathogenic | 0.8023 | pathogenic | -0.009 | Destabilizing | 0.549 | D | 0.733 | prob.delet. | N | 0.467240955 | None | None | N |
T/L | 0.1722 | likely_benign | 0.1626 | benign | 0.181 | Stabilizing | 0.25 | N | 0.623 | neutral | None | None | None | None | N |
T/M | 0.1192 | likely_benign | 0.1181 | benign | 0.081 | Stabilizing | 0.92 | D | 0.774 | deleterious | None | None | None | None | N |
T/N | 0.3382 | likely_benign | 0.3197 | benign | -0.837 | Destabilizing | 0.92 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/P | 0.5903 | likely_pathogenic | 0.5583 | ambiguous | -0.172 | Destabilizing | 0.896 | D | 0.787 | deleterious | N | 0.508917956 | None | None | N |
T/Q | 0.6572 | likely_pathogenic | 0.6391 | pathogenic | -0.517 | Destabilizing | 0.92 | D | 0.789 | deleterious | None | None | None | None | N |
T/R | 0.7851 | likely_pathogenic | 0.7675 | pathogenic | -0.373 | Destabilizing | 0.81 | D | 0.782 | deleterious | N | 0.47859726 | None | None | N |
T/S | 0.1445 | likely_benign | 0.1455 | benign | -1.175 | Destabilizing | 0.201 | N | 0.587 | neutral | N | 0.486579814 | None | None | N |
T/V | 0.1387 | likely_benign | 0.1308 | benign | -0.172 | Destabilizing | 0.002 | N | 0.227 | neutral | None | None | None | None | N |
T/W | 0.8937 | likely_pathogenic | 0.8771 | pathogenic | -0.928 | Destabilizing | 0.992 | D | 0.791 | deleterious | None | None | None | None | N |
T/Y | 0.6075 | likely_pathogenic | 0.5681 | pathogenic | -0.497 | Destabilizing | 0.92 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.