Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24974 | 75145;75146;75147 | chr2:178571212;178571211;178571210 | chr2:179435939;179435938;179435937 |
N2AB | 23333 | 70222;70223;70224 | chr2:178571212;178571211;178571210 | chr2:179435939;179435938;179435937 |
N2A | 22406 | 67441;67442;67443 | chr2:178571212;178571211;178571210 | chr2:179435939;179435938;179435937 |
N2B | 15909 | 47950;47951;47952 | chr2:178571212;178571211;178571210 | chr2:179435939;179435938;179435937 |
Novex-1 | 16034 | 48325;48326;48327 | chr2:178571212;178571211;178571210 | chr2:179435939;179435938;179435937 |
Novex-2 | 16101 | 48526;48527;48528 | chr2:178571212;178571211;178571210 | chr2:179435939;179435938;179435937 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs933954403 | None | 0.22 | D | 0.507 | 0.18 | None | gnomAD-4.0.0 | 3.18354E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85925E-06 | 0 | 3.02517E-05 |
E/K | rs372061666 | 0.333 | 0.22 | N | 0.513 | 0.127 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/K | rs372061666 | 0.333 | 0.22 | N | 0.513 | 0.127 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs372061666 | 0.333 | 0.22 | N | 0.513 | 0.127 | None | gnomAD-4.0.0 | 2.56302E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.233 | likely_benign | 0.229 | benign | -0.623 | Destabilizing | 0.22 | N | 0.507 | neutral | D | 0.523503406 | None | None | N |
E/C | 0.8387 | likely_pathogenic | 0.8212 | pathogenic | -0.331 | Destabilizing | 0.968 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/D | 0.1192 | likely_benign | 0.1083 | benign | -0.717 | Destabilizing | None | N | 0.138 | neutral | N | 0.470786429 | None | None | N |
E/F | 0.8013 | likely_pathogenic | 0.7852 | pathogenic | 0.086 | Stabilizing | 0.396 | N | 0.634 | neutral | None | None | None | None | N |
E/G | 0.2785 | likely_benign | 0.2696 | benign | -0.948 | Destabilizing | 0.22 | N | 0.491 | neutral | N | 0.511935842 | None | None | N |
E/H | 0.5788 | likely_pathogenic | 0.5405 | ambiguous | 0.249 | Stabilizing | 0.567 | D | 0.506 | neutral | None | None | None | None | N |
E/I | 0.3819 | ambiguous | 0.3634 | ambiguous | 0.252 | Stabilizing | 0.567 | D | 0.634 | neutral | None | None | None | None | N |
E/K | 0.285 | likely_benign | 0.2649 | benign | 0.074 | Stabilizing | 0.22 | N | 0.513 | neutral | N | 0.456142264 | None | None | N |
E/L | 0.4088 | ambiguous | 0.4016 | ambiguous | 0.252 | Stabilizing | 0.396 | N | 0.543 | neutral | None | None | None | None | N |
E/M | 0.5008 | ambiguous | 0.4862 | ambiguous | 0.404 | Stabilizing | 0.968 | D | 0.603 | neutral | None | None | None | None | N |
E/N | 0.3093 | likely_benign | 0.2863 | benign | -0.666 | Destabilizing | 0.396 | N | 0.466 | neutral | None | None | None | None | N |
E/P | 0.7921 | likely_pathogenic | 0.7881 | pathogenic | -0.019 | Destabilizing | 0.726 | D | 0.571 | neutral | None | None | None | None | N |
E/Q | 0.2031 | likely_benign | 0.1935 | benign | -0.531 | Destabilizing | 0.497 | N | 0.472 | neutral | N | 0.458971925 | None | None | N |
E/R | 0.3925 | ambiguous | 0.3663 | ambiguous | 0.467 | Stabilizing | 0.567 | D | 0.521 | neutral | None | None | None | None | N |
E/S | 0.2632 | likely_benign | 0.2455 | benign | -0.864 | Destabilizing | 0.157 | N | 0.493 | neutral | None | None | None | None | N |
E/T | 0.2619 | likely_benign | 0.2512 | benign | -0.574 | Destabilizing | 0.567 | D | 0.49 | neutral | None | None | None | None | N |
E/V | 0.228 | likely_benign | 0.2251 | benign | -0.019 | Destabilizing | 0.497 | N | 0.515 | neutral | N | 0.498626392 | None | None | N |
E/W | 0.9141 | likely_pathogenic | 0.902 | pathogenic | 0.435 | Stabilizing | 0.909 | D | 0.663 | neutral | None | None | None | None | N |
E/Y | 0.6822 | likely_pathogenic | 0.6629 | pathogenic | 0.395 | Stabilizing | 0.003 | N | 0.432 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.