Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24981 | 75166;75167;75168 | chr2:178571191;178571190;178571189 | chr2:179435918;179435917;179435916 |
N2AB | 23340 | 70243;70244;70245 | chr2:178571191;178571190;178571189 | chr2:179435918;179435917;179435916 |
N2A | 22413 | 67462;67463;67464 | chr2:178571191;178571190;178571189 | chr2:179435918;179435917;179435916 |
N2B | 15916 | 47971;47972;47973 | chr2:178571191;178571190;178571189 | chr2:179435918;179435917;179435916 |
Novex-1 | 16041 | 48346;48347;48348 | chr2:178571191;178571190;178571189 | chr2:179435918;179435917;179435916 |
Novex-2 | 16108 | 48547;48548;48549 | chr2:178571191;178571190;178571189 | chr2:179435918;179435917;179435916 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.665 | 0.543 | 0.340510301474 | gnomAD-4.0.0 | 6.84321E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99575E-07 | 0 | 0 |
F/V | rs1559399002 | None | 1.0 | N | 0.671 | 0.557 | 0.768676903783 | gnomAD-4.0.0 | 6.84321E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65711E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9953 | likely_pathogenic | 0.9956 | pathogenic | -3.123 | Highly Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
F/C | 0.9167 | likely_pathogenic | 0.9235 | pathogenic | -1.391 | Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.556683636 | None | None | N |
F/D | 0.9987 | likely_pathogenic | 0.9984 | pathogenic | -3.677 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
F/E | 0.9991 | likely_pathogenic | 0.999 | pathogenic | -3.448 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
F/G | 0.9961 | likely_pathogenic | 0.996 | pathogenic | -3.544 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
F/H | 0.9565 | likely_pathogenic | 0.9468 | pathogenic | -2.46 | Highly Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
F/I | 0.8991 | likely_pathogenic | 0.9217 | pathogenic | -1.705 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.486754469 | None | None | N |
F/K | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -2.255 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
F/L | 0.9881 | likely_pathogenic | 0.9899 | pathogenic | -1.705 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.507772013 | None | None | N |
F/M | 0.9461 | likely_pathogenic | 0.9511 | pathogenic | -1.267 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
F/N | 0.9901 | likely_pathogenic | 0.9891 | pathogenic | -2.893 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
F/P | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -2.197 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
F/Q | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -2.741 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
F/R | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -2.024 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
F/S | 0.9925 | likely_pathogenic | 0.9928 | pathogenic | -3.28 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.556683636 | None | None | N |
F/T | 0.9953 | likely_pathogenic | 0.9954 | pathogenic | -2.939 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
F/V | 0.9153 | likely_pathogenic | 0.9336 | pathogenic | -2.197 | Highly Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.490687581 | None | None | N |
F/W | 0.7699 | likely_pathogenic | 0.7598 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
F/Y | 0.2197 | likely_benign | 0.2194 | benign | -1.286 | Destabilizing | 0.999 | D | 0.566 | neutral | D | 0.526143854 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.