Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24986 | 75181;75182;75183 | chr2:178571176;178571175;178571174 | chr2:179435903;179435902;179435901 |
N2AB | 23345 | 70258;70259;70260 | chr2:178571176;178571175;178571174 | chr2:179435903;179435902;179435901 |
N2A | 22418 | 67477;67478;67479 | chr2:178571176;178571175;178571174 | chr2:179435903;179435902;179435901 |
N2B | 15921 | 47986;47987;47988 | chr2:178571176;178571175;178571174 | chr2:179435903;179435902;179435901 |
Novex-1 | 16046 | 48361;48362;48363 | chr2:178571176;178571175;178571174 | chr2:179435903;179435902;179435901 |
Novex-2 | 16113 | 48562;48563;48564 | chr2:178571176;178571175;178571174 | chr2:179435903;179435902;179435901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.822 | N | 0.407 | 0.172 | 0.168933306366 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4788 | ambiguous | 0.4745 | ambiguous | -1.278 | Destabilizing | 0.698 | D | 0.523 | neutral | N | 0.470822126 | None | None | I |
E/C | 0.9313 | likely_pathogenic | 0.926 | pathogenic | -0.975 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | I |
E/D | 0.8386 | likely_pathogenic | 0.8478 | pathogenic | -1.642 | Destabilizing | 0.822 | D | 0.407 | neutral | N | 0.503627275 | None | None | I |
E/F | 0.9546 | likely_pathogenic | 0.9576 | pathogenic | -1.263 | Destabilizing | 0.998 | D | 0.812 | deleterious | None | None | None | None | I |
E/G | 0.7265 | likely_pathogenic | 0.7263 | pathogenic | -1.646 | Destabilizing | 0.942 | D | 0.724 | prob.delet. | N | 0.503627275 | None | None | I |
E/H | 0.8977 | likely_pathogenic | 0.8977 | pathogenic | -1.486 | Destabilizing | 0.994 | D | 0.657 | neutral | None | None | None | None | I |
E/I | 0.5293 | ambiguous | 0.5336 | ambiguous | -0.256 | Destabilizing | 0.978 | D | 0.834 | deleterious | None | None | None | None | I |
E/K | 0.459 | ambiguous | 0.4548 | ambiguous | -1.509 | Destabilizing | 0.698 | D | 0.426 | neutral | N | 0.474634014 | None | None | I |
E/L | 0.7365 | likely_pathogenic | 0.7537 | pathogenic | -0.256 | Destabilizing | 0.956 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/M | 0.6199 | likely_pathogenic | 0.6293 | pathogenic | 0.359 | Stabilizing | 0.994 | D | 0.791 | deleterious | None | None | None | None | I |
E/N | 0.8581 | likely_pathogenic | 0.8648 | pathogenic | -1.713 | Destabilizing | 0.956 | D | 0.609 | neutral | None | None | None | None | I |
E/P | 0.9985 | likely_pathogenic | 0.9983 | pathogenic | -0.578 | Destabilizing | 0.978 | D | 0.789 | deleterious | None | None | None | None | I |
E/Q | 0.2073 | likely_benign | 0.1945 | benign | -1.492 | Destabilizing | 0.058 | N | 0.287 | neutral | N | 0.466796428 | None | None | I |
E/R | 0.6536 | likely_pathogenic | 0.6362 | pathogenic | -1.392 | Destabilizing | 0.915 | D | 0.597 | neutral | None | None | None | None | I |
E/S | 0.6277 | likely_pathogenic | 0.6323 | pathogenic | -2.264 | Highly Destabilizing | 0.754 | D | 0.434 | neutral | None | None | None | None | I |
E/T | 0.6226 | likely_pathogenic | 0.6276 | pathogenic | -1.935 | Destabilizing | 0.956 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/V | 0.3528 | ambiguous | 0.3565 | ambiguous | -0.578 | Destabilizing | 0.942 | D | 0.747 | deleterious | N | 0.472007433 | None | None | I |
E/W | 0.9885 | likely_pathogenic | 0.9875 | pathogenic | -1.37 | Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | I |
E/Y | 0.9465 | likely_pathogenic | 0.9446 | pathogenic | -1.111 | Destabilizing | 0.978 | D | 0.821 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.