Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2500 | 7723;7724;7725 | chr2:178773558;178773557;178773556 | chr2:179638285;179638284;179638283 |
N2AB | 2500 | 7723;7724;7725 | chr2:178773558;178773557;178773556 | chr2:179638285;179638284;179638283 |
N2A | 2500 | 7723;7724;7725 | chr2:178773558;178773557;178773556 | chr2:179638285;179638284;179638283 |
N2B | 2454 | 7585;7586;7587 | chr2:178773558;178773557;178773556 | chr2:179638285;179638284;179638283 |
Novex-1 | 2454 | 7585;7586;7587 | chr2:178773558;178773557;178773556 | chr2:179638285;179638284;179638283 |
Novex-2 | 2454 | 7585;7586;7587 | chr2:178773558;178773557;178773556 | chr2:179638285;179638284;179638283 |
Novex-3 | 2500 | 7723;7724;7725 | chr2:178773558;178773557;178773556 | chr2:179638285;179638284;179638283 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1417536595 | -0.624 | 0.997 | N | 0.631 | 0.416 | 0.124217242631 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 6.15E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/R | rs1417536595 | -0.624 | 0.997 | N | 0.631 | 0.416 | 0.124217242631 | gnomAD-4.0.0 | 1.59066E-06 | None | None | None | None | N | None | 5.65355E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.6111 | likely_pathogenic | 0.6076 | pathogenic | -1.075 | Destabilizing | 0.997 | D | 0.691 | prob.neutral | None | None | None | None | N |
Q/C | 0.8284 | likely_pathogenic | 0.8245 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Q/D | 0.9731 | likely_pathogenic | 0.9698 | pathogenic | -2.495 | Highly Destabilizing | 0.997 | D | 0.625 | neutral | None | None | None | None | N |
Q/E | 0.3316 | likely_benign | 0.3222 | benign | -2.127 | Highly Destabilizing | 0.992 | D | 0.587 | neutral | D | 0.531369096 | None | None | N |
Q/F | 0.9017 | likely_pathogenic | 0.9018 | pathogenic | -0.478 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
Q/G | 0.7846 | likely_pathogenic | 0.7747 | pathogenic | -1.587 | Destabilizing | 0.997 | D | 0.723 | prob.delet. | None | None | None | None | N |
Q/H | 0.5191 | ambiguous | 0.5014 | ambiguous | -1.164 | Destabilizing | 0.999 | D | 0.751 | deleterious | N | 0.439419769 | None | None | N |
Q/I | 0.6867 | likely_pathogenic | 0.6918 | pathogenic | 0.352 | Stabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
Q/K | 0.5555 | ambiguous | 0.5389 | ambiguous | -0.567 | Destabilizing | 0.997 | D | 0.632 | neutral | N | 0.491056558 | None | None | N |
Q/L | 0.3474 | ambiguous | 0.3563 | ambiguous | 0.352 | Stabilizing | 0.997 | D | 0.723 | prob.delet. | N | 0.43718761 | None | None | N |
Q/M | 0.5569 | ambiguous | 0.5625 | ambiguous | 0.412 | Stabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
Q/N | 0.6976 | likely_pathogenic | 0.6914 | pathogenic | -1.818 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
Q/P | 0.9578 | likely_pathogenic | 0.9591 | pathogenic | -0.098 | Destabilizing | 0.999 | D | 0.76 | deleterious | D | 0.531369096 | None | None | N |
Q/R | 0.5524 | ambiguous | 0.5383 | ambiguous | -0.939 | Destabilizing | 0.997 | D | 0.631 | neutral | N | 0.440563572 | None | None | N |
Q/S | 0.6788 | likely_pathogenic | 0.6659 | pathogenic | -1.977 | Destabilizing | 0.997 | D | 0.618 | neutral | None | None | None | None | N |
Q/T | 0.6152 | likely_pathogenic | 0.5931 | pathogenic | -1.4 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
Q/V | 0.5274 | ambiguous | 0.5355 | ambiguous | -0.098 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
Q/W | 0.9257 | likely_pathogenic | 0.9246 | pathogenic | -0.643 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Q/Y | 0.7641 | likely_pathogenic | 0.7644 | pathogenic | -0.188 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.