Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25004 | 75235;75236;75237 | chr2:178571122;178571121;178571120 | chr2:179435849;179435848;179435847 |
N2AB | 23363 | 70312;70313;70314 | chr2:178571122;178571121;178571120 | chr2:179435849;179435848;179435847 |
N2A | 22436 | 67531;67532;67533 | chr2:178571122;178571121;178571120 | chr2:179435849;179435848;179435847 |
N2B | 15939 | 48040;48041;48042 | chr2:178571122;178571121;178571120 | chr2:179435849;179435848;179435847 |
Novex-1 | 16064 | 48415;48416;48417 | chr2:178571122;178571121;178571120 | chr2:179435849;179435848;179435847 |
Novex-2 | 16131 | 48616;48617;48618 | chr2:178571122;178571121;178571120 | chr2:179435849;179435848;179435847 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs1320326326 | -0.333 | 0.984 | N | 0.85 | 0.218 | 0.300784259202 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/C | rs1320326326 | -0.333 | 0.984 | N | 0.85 | 0.218 | 0.300784259202 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/C | rs1320326326 | -0.333 | 0.984 | N | 0.85 | 0.218 | 0.300784259202 | gnomAD-4.0.0 | 6.19869E-06 | None | None | None | None | N | None | 5.34202E-05 | 1.66756E-05 | None | 0 | 0 | None | 0 | 0 | 3.39099E-06 | 1.09798E-05 | 0 |
R/G | rs1320326326 | -0.765 | 0.249 | N | 0.533 | 0.143 | 0.251639045875 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
R/G | rs1320326326 | -0.765 | 0.249 | N | 0.533 | 0.143 | 0.251639045875 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/G | rs1320326326 | -0.765 | 0.249 | N | 0.533 | 0.143 | 0.251639045875 | gnomAD-4.0.0 | 1.85961E-06 | None | None | None | None | N | None | 1.33551E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.6955E-06 | 0 | 0 |
R/H | rs909041164 | -1.062 | 0.002 | N | 0.202 | 0.185 | 0.233150807113 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
R/H | rs909041164 | -1.062 | 0.002 | N | 0.202 | 0.185 | 0.233150807113 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
R/H | rs909041164 | -1.062 | 0.002 | N | 0.202 | 0.185 | 0.233150807113 | gnomAD-4.0.0 | 1.85961E-05 | None | None | None | None | N | None | 2.6713E-05 | 1.66744E-05 | None | 0 | 0 | None | 0 | 0 | 1.9498E-05 | 2.19616E-05 | 3.20318E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5442 | ambiguous | 0.559 | ambiguous | -0.788 | Destabilizing | 0.147 | N | 0.541 | neutral | None | None | None | None | N |
R/C | 0.1747 | likely_benign | 0.182 | benign | -0.733 | Destabilizing | 0.984 | D | 0.85 | deleterious | N | 0.477276906 | None | None | N |
R/D | 0.8851 | likely_pathogenic | 0.8938 | pathogenic | -0.199 | Destabilizing | 0.378 | N | 0.559 | neutral | None | None | None | None | N |
R/E | 0.5539 | ambiguous | 0.5745 | pathogenic | -0.12 | Destabilizing | 0.08 | N | 0.471 | neutral | None | None | None | None | N |
R/F | 0.6381 | likely_pathogenic | 0.6702 | pathogenic | -0.903 | Destabilizing | 0.378 | N | 0.812 | deleterious | None | None | None | None | N |
R/G | 0.4634 | ambiguous | 0.4728 | ambiguous | -1.037 | Destabilizing | 0.249 | N | 0.533 | neutral | N | 0.513992915 | None | None | N |
R/H | 0.1274 | likely_benign | 0.1362 | benign | -1.336 | Destabilizing | 0.002 | N | 0.202 | neutral | N | 0.511256917 | None | None | N |
R/I | 0.3608 | ambiguous | 0.3903 | ambiguous | -0.139 | Destabilizing | 0.552 | D | 0.8 | deleterious | None | None | None | None | N |
R/K | 0.1394 | likely_benign | 0.1407 | benign | -0.835 | Destabilizing | 0.067 | N | 0.439 | neutral | None | None | None | None | N |
R/L | 0.326 | likely_benign | 0.3434 | ambiguous | -0.139 | Destabilizing | 0.249 | N | 0.504 | neutral | N | 0.519265449 | None | None | N |
R/M | 0.3976 | ambiguous | 0.4148 | ambiguous | -0.294 | Destabilizing | 0.934 | D | 0.561 | neutral | None | None | None | None | N |
R/N | 0.7414 | likely_pathogenic | 0.7674 | pathogenic | -0.239 | Destabilizing | 0.08 | N | 0.547 | neutral | None | None | None | None | N |
R/P | 0.9656 | likely_pathogenic | 0.9679 | pathogenic | -0.335 | Destabilizing | 0.702 | D | 0.827 | deleterious | N | 0.512395404 | None | None | N |
R/Q | 0.1252 | likely_benign | 0.1235 | benign | -0.524 | Destabilizing | 0.378 | N | 0.572 | neutral | None | None | None | None | N |
R/S | 0.6446 | likely_pathogenic | 0.6618 | pathogenic | -0.968 | Destabilizing | 0.249 | N | 0.563 | neutral | N | 0.464880189 | None | None | N |
R/T | 0.388 | ambiguous | 0.4191 | ambiguous | -0.737 | Destabilizing | 0.378 | N | 0.498 | neutral | None | None | None | None | N |
R/V | 0.4167 | ambiguous | 0.4411 | ambiguous | -0.335 | Destabilizing | 0.552 | D | 0.787 | deleterious | None | None | None | None | N |
R/W | 0.2486 | likely_benign | 0.2624 | benign | -0.628 | Destabilizing | 0.934 | D | 0.865 | deleterious | None | None | None | None | N |
R/Y | 0.467 | ambiguous | 0.503 | ambiguous | -0.3 | Destabilizing | 0.233 | N | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.