Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25009 | 75250;75251;75252 | chr2:178571107;178571106;178571105 | chr2:179435834;179435833;179435832 |
N2AB | 23368 | 70327;70328;70329 | chr2:178571107;178571106;178571105 | chr2:179435834;179435833;179435832 |
N2A | 22441 | 67546;67547;67548 | chr2:178571107;178571106;178571105 | chr2:179435834;179435833;179435832 |
N2B | 15944 | 48055;48056;48057 | chr2:178571107;178571106;178571105 | chr2:179435834;179435833;179435832 |
Novex-1 | 16069 | 48430;48431;48432 | chr2:178571107;178571106;178571105 | chr2:179435834;179435833;179435832 |
Novex-2 | 16136 | 48631;48632;48633 | chr2:178571107;178571106;178571105 | chr2:179435834;179435833;179435832 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1474848898 | -0.827 | 0.999 | N | 0.841 | 0.344 | 0.675682906761 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/L | rs1474848898 | -0.827 | 0.999 | N | 0.841 | 0.344 | 0.675682906761 | gnomAD-4.0.0 | 3.18404E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86599E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0894 | likely_benign | 0.0863 | benign | -1.182 | Destabilizing | 0.998 | D | 0.732 | prob.delet. | N | 0.491982847 | None | None | N |
P/C | 0.5658 | likely_pathogenic | 0.5366 | ambiguous | -1.063 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
P/D | 0.8791 | likely_pathogenic | 0.8491 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
P/E | 0.5743 | likely_pathogenic | 0.5267 | ambiguous | -1.891 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
P/F | 0.7214 | likely_pathogenic | 0.6972 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/G | 0.5785 | likely_pathogenic | 0.539 | ambiguous | -1.385 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
P/H | 0.3857 | ambiguous | 0.3613 | ambiguous | -0.907 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
P/I | 0.4493 | ambiguous | 0.3959 | ambiguous | -0.747 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/K | 0.4247 | ambiguous | 0.3751 | ambiguous | -0.882 | Destabilizing | 0.994 | D | 0.751 | deleterious | None | None | None | None | N |
P/L | 0.2443 | likely_benign | 0.227 | benign | -0.747 | Destabilizing | 0.999 | D | 0.841 | deleterious | N | 0.500276822 | None | None | N |
P/M | 0.4847 | ambiguous | 0.4494 | ambiguous | -0.479 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/N | 0.7006 | likely_pathogenic | 0.6633 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/Q | 0.3046 | likely_benign | 0.2778 | benign | -1.132 | Destabilizing | 0.999 | D | 0.829 | deleterious | N | 0.488956515 | None | None | N |
P/R | 0.2807 | likely_benign | 0.2494 | benign | -0.281 | Destabilizing | 0.434 | N | 0.601 | neutral | N | 0.483373881 | None | None | N |
P/S | 0.204 | likely_benign | 0.1995 | benign | -1.126 | Destabilizing | 0.999 | D | 0.798 | deleterious | N | 0.482613412 | None | None | N |
P/T | 0.2197 | likely_benign | 0.1994 | benign | -1.108 | Destabilizing | 0.999 | D | 0.799 | deleterious | N | 0.498288585 | None | None | N |
P/V | 0.3158 | likely_benign | 0.2784 | benign | -0.86 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
P/W | 0.8966 | likely_pathogenic | 0.8727 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
P/Y | 0.7259 | likely_pathogenic | 0.6921 | pathogenic | -1.177 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.