Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25024 | 75295;75296;75297 | chr2:178571062;178571061;178571060 | chr2:179435789;179435788;179435787 |
N2AB | 23383 | 70372;70373;70374 | chr2:178571062;178571061;178571060 | chr2:179435789;179435788;179435787 |
N2A | 22456 | 67591;67592;67593 | chr2:178571062;178571061;178571060 | chr2:179435789;179435788;179435787 |
N2B | 15959 | 48100;48101;48102 | chr2:178571062;178571061;178571060 | chr2:179435789;179435788;179435787 |
Novex-1 | 16084 | 48475;48476;48477 | chr2:178571062;178571061;178571060 | chr2:179435789;179435788;179435787 |
Novex-2 | 16151 | 48676;48677;48678 | chr2:178571062;178571061;178571060 | chr2:179435789;179435788;179435787 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs1559397320 | None | 0.958 | N | 0.413 | 0.302 | 0.246773566709 | gnomAD-4.0.0 | 1.59392E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8648E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0938 | likely_benign | 0.0963 | benign | -1.015 | Destabilizing | 0.958 | D | 0.417 | neutral | N | 0.477764794 | None | None | N |
T/C | 0.3713 | ambiguous | 0.35 | ambiguous | -0.819 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/D | 0.5366 | ambiguous | 0.5353 | ambiguous | -0.926 | Destabilizing | 0.086 | N | 0.378 | neutral | None | None | None | None | N |
T/E | 0.4028 | ambiguous | 0.3961 | ambiguous | -0.802 | Destabilizing | 0.938 | D | 0.531 | neutral | None | None | None | None | N |
T/F | 0.2308 | likely_benign | 0.2153 | benign | -0.704 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
T/G | 0.3454 | ambiguous | 0.3338 | benign | -1.378 | Destabilizing | 0.968 | D | 0.616 | neutral | None | None | None | None | N |
T/H | 0.2435 | likely_benign | 0.2267 | benign | -1.526 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
T/I | 0.1505 | likely_benign | 0.1453 | benign | -0.096 | Destabilizing | 0.994 | D | 0.703 | prob.neutral | N | 0.486412074 | None | None | N |
T/K | 0.2097 | likely_benign | 0.2056 | benign | -0.72 | Destabilizing | 0.991 | D | 0.644 | neutral | None | None | None | None | N |
T/L | 0.1107 | likely_benign | 0.1043 | benign | -0.096 | Destabilizing | 0.984 | D | 0.58 | neutral | None | None | None | None | N |
T/M | 0.0918 | likely_benign | 0.0884 | benign | -0.107 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/N | 0.1537 | likely_benign | 0.1488 | benign | -1.076 | Destabilizing | 0.976 | D | 0.571 | neutral | N | 0.477524531 | None | None | N |
T/P | 0.6821 | likely_pathogenic | 0.6757 | pathogenic | -0.37 | Destabilizing | 0.994 | D | 0.703 | prob.neutral | N | 0.519355355 | None | None | N |
T/Q | 0.2423 | likely_benign | 0.2322 | benign | -1.018 | Destabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/R | 0.1817 | likely_benign | 0.1688 | benign | -0.731 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/S | 0.1087 | likely_benign | 0.1073 | benign | -1.335 | Destabilizing | 0.958 | D | 0.413 | neutral | N | 0.510515466 | None | None | N |
T/V | 0.1319 | likely_benign | 0.13 | benign | -0.37 | Destabilizing | 0.984 | D | 0.45 | neutral | None | None | None | None | N |
T/W | 0.6 | likely_pathogenic | 0.5769 | pathogenic | -0.744 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
T/Y | 0.2668 | likely_benign | 0.2481 | benign | -0.434 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.