Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25025 | 75298;75299;75300 | chr2:178571059;178571058;178571057 | chr2:179435786;179435785;179435784 |
N2AB | 23384 | 70375;70376;70377 | chr2:178571059;178571058;178571057 | chr2:179435786;179435785;179435784 |
N2A | 22457 | 67594;67595;67596 | chr2:178571059;178571058;178571057 | chr2:179435786;179435785;179435784 |
N2B | 15960 | 48103;48104;48105 | chr2:178571059;178571058;178571057 | chr2:179435786;179435785;179435784 |
Novex-1 | 16085 | 48478;48479;48480 | chr2:178571059;178571058;178571057 | chr2:179435786;179435785;179435784 |
Novex-2 | 16152 | 48679;48680;48681 | chr2:178571059;178571058;178571057 | chr2:179435786;179435785;179435784 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs3731743 | None | 1.0 | D | 0.925 | 0.698 | 0.769630570616 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94099E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs3731743 | None | 1.0 | D | 0.925 | 0.698 | 0.769630570616 | gnomAD-4.0.0 | 6.8216E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23145E-04 | None | 0 | 0 | 8.48274E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9609 | likely_pathogenic | 0.9564 | pathogenic | -2.857 | Highly Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
L/C | 0.9319 | likely_pathogenic | 0.922 | pathogenic | -1.871 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.588 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | N |
L/E | 0.9977 | likely_pathogenic | 0.9975 | pathogenic | -3.255 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/F | 0.7822 | likely_pathogenic | 0.7619 | pathogenic | -1.711 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.519760202 | None | None | N |
L/G | 0.9956 | likely_pathogenic | 0.9948 | pathogenic | -3.465 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/H | 0.9959 | likely_pathogenic | 0.9951 | pathogenic | -3.169 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.550741699 | None | None | N |
L/I | 0.1163 | likely_benign | 0.1161 | benign | -1.011 | Destabilizing | 0.999 | D | 0.559 | neutral | N | 0.494044504 | None | None | N |
L/K | 0.9965 | likely_pathogenic | 0.9962 | pathogenic | -2.257 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/M | 0.3842 | ambiguous | 0.3535 | ambiguous | -1.137 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
L/N | 0.9982 | likely_pathogenic | 0.9978 | pathogenic | -3.032 | Highly Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
L/P | 0.9978 | likely_pathogenic | 0.9975 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.925 | deleterious | D | 0.55048821 | None | None | N |
L/Q | 0.9926 | likely_pathogenic | 0.9908 | pathogenic | -2.641 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/R | 0.9928 | likely_pathogenic | 0.9919 | pathogenic | -2.349 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | D | 0.55048821 | None | None | N |
L/S | 0.9948 | likely_pathogenic | 0.9938 | pathogenic | -3.524 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/T | 0.9657 | likely_pathogenic | 0.9613 | pathogenic | -3.027 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.1467 | likely_benign | 0.1472 | benign | -1.62 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.4646267 | None | None | N |
L/W | 0.9892 | likely_pathogenic | 0.9867 | pathogenic | -2.094 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
L/Y | 0.9875 | likely_pathogenic | 0.9862 | pathogenic | -1.92 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.