Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25026 | 75301;75302;75303 | chr2:178571056;178571055;178571054 | chr2:179435783;179435782;179435781 |
N2AB | 23385 | 70378;70379;70380 | chr2:178571056;178571055;178571054 | chr2:179435783;179435782;179435781 |
N2A | 22458 | 67597;67598;67599 | chr2:178571056;178571055;178571054 | chr2:179435783;179435782;179435781 |
N2B | 15961 | 48106;48107;48108 | chr2:178571056;178571055;178571054 | chr2:179435783;179435782;179435781 |
Novex-1 | 16086 | 48481;48482;48483 | chr2:178571056;178571055;178571054 | chr2:179435783;179435782;179435781 |
Novex-2 | 16153 | 48682;48683;48684 | chr2:178571056;178571055;178571054 | chr2:179435783;179435782;179435781 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.856 | N | 0.515 | 0.376 | 0.294561560033 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2741 | likely_benign | 0.2601 | benign | -0.773 | Destabilizing | 0.209 | N | 0.403 | neutral | None | None | None | None | N |
Q/C | 0.5203 | ambiguous | 0.4894 | ambiguous | -0.137 | Destabilizing | 0.991 | D | 0.539 | neutral | None | None | None | None | N |
Q/D | 0.6486 | likely_pathogenic | 0.6067 | pathogenic | -1.009 | Destabilizing | 0.722 | D | 0.291 | neutral | None | None | None | None | N |
Q/E | 0.1147 | likely_benign | 0.1069 | benign | -0.818 | Destabilizing | 0.285 | N | 0.339 | neutral | N | 0.456334265 | None | None | N |
Q/F | 0.6852 | likely_pathogenic | 0.6493 | pathogenic | -0.169 | Destabilizing | 0.818 | D | 0.523 | neutral | None | None | None | None | N |
Q/G | 0.4216 | ambiguous | 0.4011 | ambiguous | -1.207 | Destabilizing | 0.722 | D | 0.468 | neutral | None | None | None | None | N |
Q/H | 0.2372 | likely_benign | 0.2235 | benign | -0.943 | Destabilizing | 0.873 | D | 0.443 | neutral | N | 0.503050776 | None | None | N |
Q/I | 0.3691 | ambiguous | 0.3468 | ambiguous | 0.383 | Stabilizing | 0.39 | N | 0.49 | neutral | None | None | None | None | N |
Q/K | 0.1104 | likely_benign | 0.1077 | benign | -0.504 | Destabilizing | 0.005 | N | 0.209 | neutral | N | 0.442655679 | None | None | N |
Q/L | 0.1539 | likely_benign | 0.1415 | benign | 0.383 | Stabilizing | 0.166 | N | 0.417 | neutral | N | 0.502877418 | None | None | N |
Q/M | 0.3493 | ambiguous | 0.3308 | benign | 0.695 | Stabilizing | 0.901 | D | 0.441 | neutral | None | None | None | None | N |
Q/N | 0.4367 | ambiguous | 0.4107 | ambiguous | -1.137 | Destabilizing | 0.561 | D | 0.297 | neutral | None | None | None | None | N |
Q/P | 0.9111 | likely_pathogenic | 0.9005 | pathogenic | 0.028 | Stabilizing | 0.856 | D | 0.515 | neutral | N | 0.504743365 | None | None | N |
Q/R | 0.1117 | likely_benign | 0.1082 | benign | -0.596 | Destabilizing | None | N | 0.204 | neutral | N | 0.457046341 | None | None | N |
Q/S | 0.2899 | likely_benign | 0.275 | benign | -1.32 | Destabilizing | 0.345 | N | 0.303 | neutral | None | None | None | None | N |
Q/T | 0.221 | likely_benign | 0.214 | benign | -0.93 | Destabilizing | 0.561 | D | 0.394 | neutral | None | None | None | None | N |
Q/V | 0.2642 | likely_benign | 0.2445 | benign | 0.028 | Stabilizing | 0.004 | N | 0.437 | neutral | None | None | None | None | N |
Q/W | 0.605 | likely_pathogenic | 0.5495 | ambiguous | -0.13 | Destabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | N |
Q/Y | 0.4816 | ambiguous | 0.44 | ambiguous | 0.147 | Stabilizing | 0.901 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.