Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25028 | 75307;75308;75309 | chr2:178571050;178571049;178571048 | chr2:179435777;179435776;179435775 |
N2AB | 23387 | 70384;70385;70386 | chr2:178571050;178571049;178571048 | chr2:179435777;179435776;179435775 |
N2A | 22460 | 67603;67604;67605 | chr2:178571050;178571049;178571048 | chr2:179435777;179435776;179435775 |
N2B | 15963 | 48112;48113;48114 | chr2:178571050;178571049;178571048 | chr2:179435777;179435776;179435775 |
Novex-1 | 16088 | 48487;48488;48489 | chr2:178571050;178571049;178571048 | chr2:179435777;179435776;179435775 |
Novex-2 | 16155 | 48688;48689;48690 | chr2:178571050;178571049;178571048 | chr2:179435777;179435776;179435775 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1708004980 | None | 0.491 | N | 0.452 | 0.147 | 0.228597637076 | gnomAD-4.0.0 | 4.10883E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.40173E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2702 | likely_benign | 0.2624 | benign | -0.124 | Destabilizing | 0.103 | N | 0.255 | neutral | None | None | None | None | N |
K/C | 0.6233 | likely_pathogenic | 0.6117 | pathogenic | -0.157 | Destabilizing | 0.991 | D | 0.543 | neutral | None | None | None | None | N |
K/D | 0.4091 | ambiguous | 0.3752 | ambiguous | 0.06 | Stabilizing | 0.561 | D | 0.498 | neutral | None | None | None | None | N |
K/E | 0.1236 | likely_benign | 0.1184 | benign | 0.102 | Stabilizing | 0.285 | N | 0.465 | neutral | N | 0.454179394 | None | None | N |
K/F | 0.7557 | likely_pathogenic | 0.7315 | pathogenic | -0.077 | Destabilizing | 0.901 | D | 0.592 | neutral | None | None | None | None | N |
K/G | 0.3317 | likely_benign | 0.3091 | benign | -0.401 | Destabilizing | 0.345 | N | 0.439 | neutral | None | None | None | None | N |
K/H | 0.2878 | likely_benign | 0.2685 | benign | -0.742 | Destabilizing | 0.965 | D | 0.573 | neutral | None | None | None | None | N |
K/I | 0.3867 | ambiguous | 0.365 | ambiguous | 0.55 | Stabilizing | 0.561 | D | 0.601 | neutral | None | None | None | None | N |
K/L | 0.3163 | likely_benign | 0.2938 | benign | 0.55 | Stabilizing | 0.209 | N | 0.44 | neutral | None | None | None | None | N |
K/M | 0.1904 | likely_benign | 0.1817 | benign | 0.35 | Stabilizing | 0.954 | D | 0.573 | neutral | N | 0.514846638 | None | None | N |
K/N | 0.2815 | likely_benign | 0.2627 | benign | 0.13 | Stabilizing | 0.491 | N | 0.459 | neutral | N | 0.502146699 | None | None | N |
K/P | 0.7016 | likely_pathogenic | 0.682 | pathogenic | 0.355 | Stabilizing | 0.722 | D | 0.607 | neutral | None | None | None | None | N |
K/Q | 0.1003 | likely_benign | 0.0971 | benign | -0.019 | Destabilizing | 0.662 | D | 0.529 | neutral | N | 0.470015638 | None | None | N |
K/R | 0.0833 | likely_benign | 0.0814 | benign | -0.227 | Destabilizing | 0.491 | N | 0.452 | neutral | N | 0.499530469 | None | None | N |
K/S | 0.2827 | likely_benign | 0.2714 | benign | -0.403 | Destabilizing | 0.021 | N | 0.155 | neutral | None | None | None | None | N |
K/T | 0.1156 | likely_benign | 0.1117 | benign | -0.19 | Destabilizing | None | N | 0.267 | neutral | N | 0.40065434 | None | None | N |
K/V | 0.3178 | likely_benign | 0.3019 | benign | 0.355 | Stabilizing | 0.209 | N | 0.473 | neutral | None | None | None | None | N |
K/W | 0.751 | likely_pathogenic | 0.7363 | pathogenic | -0.027 | Destabilizing | 0.991 | D | 0.56 | neutral | None | None | None | None | N |
K/Y | 0.6088 | likely_pathogenic | 0.5794 | pathogenic | 0.283 | Stabilizing | 0.965 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.