Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25029 | 75310;75311;75312 | chr2:178571047;178571046;178571045 | chr2:179435774;179435773;179435772 |
N2AB | 23388 | 70387;70388;70389 | chr2:178571047;178571046;178571045 | chr2:179435774;179435773;179435772 |
N2A | 22461 | 67606;67607;67608 | chr2:178571047;178571046;178571045 | chr2:179435774;179435773;179435772 |
N2B | 15964 | 48115;48116;48117 | chr2:178571047;178571046;178571045 | chr2:179435774;179435773;179435772 |
Novex-1 | 16089 | 48490;48491;48492 | chr2:178571047;178571046;178571045 | chr2:179435774;179435773;179435772 |
Novex-2 | 16156 | 48691;48692;48693 | chr2:178571047;178571046;178571045 | chr2:179435774;179435773;179435772 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.989 | N | 0.539 | 0.254 | 0.251116650651 | gnomAD-4.0.0 | 1.59439E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86618E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3495 | ambiguous | 0.3309 | benign | -0.718 | Destabilizing | 0.983 | D | 0.596 | neutral | None | None | None | None | N |
K/C | 0.743 | likely_pathogenic | 0.7235 | pathogenic | -0.863 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
K/D | 0.8069 | likely_pathogenic | 0.7594 | pathogenic | -0.646 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/E | 0.2551 | likely_benign | 0.2275 | benign | -0.497 | Destabilizing | 0.989 | D | 0.539 | neutral | N | 0.488734685 | None | None | N |
K/F | 0.8557 | likely_pathogenic | 0.8223 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/G | 0.6481 | likely_pathogenic | 0.6059 | pathogenic | -1.062 | Destabilizing | 0.998 | D | 0.674 | neutral | None | None | None | None | N |
K/H | 0.475 | ambiguous | 0.4394 | ambiguous | -1.078 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/I | 0.3925 | ambiguous | 0.3394 | benign | 0.183 | Stabilizing | 0.999 | D | 0.748 | deleterious | N | 0.493916811 | None | None | N |
K/L | 0.406 | ambiguous | 0.3614 | ambiguous | 0.183 | Stabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | N |
K/M | 0.2503 | likely_benign | 0.2208 | benign | -0.272 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/N | 0.6275 | likely_pathogenic | 0.5667 | pathogenic | -0.805 | Destabilizing | 0.999 | D | 0.667 | neutral | N | 0.469571586 | None | None | N |
K/P | 0.3649 | ambiguous | 0.3517 | ambiguous | -0.091 | Destabilizing | 0.154 | N | 0.388 | neutral | None | None | None | None | N |
K/Q | 0.1477 | likely_benign | 0.1361 | benign | -0.722 | Destabilizing | 0.999 | D | 0.664 | neutral | N | 0.482232787 | None | None | N |
K/R | 0.0987 | likely_benign | 0.0975 | benign | -0.547 | Destabilizing | 0.996 | D | 0.597 | neutral | N | 0.465551181 | None | None | N |
K/S | 0.5735 | likely_pathogenic | 0.5242 | ambiguous | -1.302 | Destabilizing | 0.992 | D | 0.598 | neutral | None | None | None | None | N |
K/T | 0.2847 | likely_benign | 0.2508 | benign | -0.945 | Destabilizing | 0.997 | D | 0.714 | prob.delet. | N | 0.470786127 | None | None | N |
K/V | 0.3589 | ambiguous | 0.3222 | benign | -0.091 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/W | 0.8706 | likely_pathogenic | 0.8486 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
K/Y | 0.7285 | likely_pathogenic | 0.6842 | pathogenic | -0.113 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.