Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25033 | 75322;75323;75324 | chr2:178571035;178571034;178571033 | chr2:179435762;179435761;179435760 |
N2AB | 23392 | 70399;70400;70401 | chr2:178571035;178571034;178571033 | chr2:179435762;179435761;179435760 |
N2A | 22465 | 67618;67619;67620 | chr2:178571035;178571034;178571033 | chr2:179435762;179435761;179435760 |
N2B | 15968 | 48127;48128;48129 | chr2:178571035;178571034;178571033 | chr2:179435762;179435761;179435760 |
Novex-1 | 16093 | 48502;48503;48504 | chr2:178571035;178571034;178571033 | chr2:179435762;179435761;179435760 |
Novex-2 | 16160 | 48703;48704;48705 | chr2:178571035;178571034;178571033 | chr2:179435762;179435761;179435760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.452 | 0.39 | 0.366085729538 | gnomAD-4.0.0 | 1.36964E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80057E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7878 | likely_pathogenic | 0.7983 | pathogenic | -0.529 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.498324584 | None | None | I |
D/C | 0.9402 | likely_pathogenic | 0.9437 | pathogenic | -0.186 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
D/E | 0.7611 | likely_pathogenic | 0.7658 | pathogenic | -0.798 | Destabilizing | 1.0 | D | 0.452 | neutral | N | 0.493525191 | None | None | I |
D/F | 0.9676 | likely_pathogenic | 0.9732 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
D/G | 0.7906 | likely_pathogenic | 0.7939 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.521735211 | None | None | I |
D/H | 0.8689 | likely_pathogenic | 0.8702 | pathogenic | -1.057 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.513239288 | None | None | I |
D/I | 0.9345 | likely_pathogenic | 0.9435 | pathogenic | 0.286 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
D/K | 0.9593 | likely_pathogenic | 0.9598 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
D/L | 0.92 | likely_pathogenic | 0.9348 | pathogenic | 0.286 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | I |
D/M | 0.9661 | likely_pathogenic | 0.971 | pathogenic | 0.842 | Stabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
D/N | 0.2027 | likely_benign | 0.2277 | benign | -0.735 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.511998334 | None | None | I |
D/P | 0.9765 | likely_pathogenic | 0.9772 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
D/Q | 0.919 | likely_pathogenic | 0.9181 | pathogenic | -0.614 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
D/R | 0.9477 | likely_pathogenic | 0.9474 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
D/S | 0.3933 | ambiguous | 0.4141 | ambiguous | -0.989 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
D/T | 0.5553 | ambiguous | 0.5995 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
D/V | 0.8485 | likely_pathogenic | 0.8655 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.767 | deleterious | N | 0.512732309 | None | None | I |
D/W | 0.9934 | likely_pathogenic | 0.9938 | pathogenic | -0.62 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
D/Y | 0.8298 | likely_pathogenic | 0.8416 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.548233257 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.