Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25037 | 75334;75335;75336 | chr2:178571023;178571022;178571021 | chr2:179435750;179435749;179435748 |
N2AB | 23396 | 70411;70412;70413 | chr2:178571023;178571022;178571021 | chr2:179435750;179435749;179435748 |
N2A | 22469 | 67630;67631;67632 | chr2:178571023;178571022;178571021 | chr2:179435750;179435749;179435748 |
N2B | 15972 | 48139;48140;48141 | chr2:178571023;178571022;178571021 | chr2:179435750;179435749;179435748 |
Novex-1 | 16097 | 48514;48515;48516 | chr2:178571023;178571022;178571021 | chr2:179435750;179435749;179435748 |
Novex-2 | 16164 | 48715;48716;48717 | chr2:178571023;178571022;178571021 | chr2:179435750;179435749;179435748 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | None | None | 0.999 | N | 0.624 | 0.377 | 0.240491677333 | gnomAD-4.0.0 | 6.84696E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0015E-07 | 0 | 0 |
K/T | None | None | 0.967 | N | 0.585 | 0.344 | 0.210429274316 | gnomAD-4.0.0 | 1.36939E-06 | None | None | None | None | I | None | 0 | 2.23734E-05 | None | 0 | 0 | None | 0 | 0 | 9.0015E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4328 | ambiguous | 0.4117 | ambiguous | -0.123 | Destabilizing | 0.916 | D | 0.587 | neutral | None | None | None | None | I |
K/C | 0.7162 | likely_pathogenic | 0.7182 | pathogenic | -0.18 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
K/D | 0.7923 | likely_pathogenic | 0.7713 | pathogenic | 0.153 | Stabilizing | 0.987 | D | 0.587 | neutral | None | None | None | None | I |
K/E | 0.3455 | ambiguous | 0.338 | benign | 0.156 | Stabilizing | 0.892 | D | 0.582 | neutral | N | 0.470038989 | None | None | I |
K/F | 0.8509 | likely_pathogenic | 0.8449 | pathogenic | -0.393 | Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | I |
K/G | 0.6445 | likely_pathogenic | 0.6292 | pathogenic | -0.325 | Destabilizing | 0.975 | D | 0.537 | neutral | None | None | None | None | I |
K/H | 0.4157 | ambiguous | 0.4054 | ambiguous | -0.7 | Destabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | I |
K/I | 0.4017 | ambiguous | 0.3806 | ambiguous | 0.33 | Stabilizing | 0.987 | D | 0.661 | neutral | None | None | None | None | I |
K/L | 0.4111 | ambiguous | 0.4001 | ambiguous | 0.33 | Stabilizing | 0.975 | D | 0.536 | neutral | None | None | None | None | I |
K/M | 0.2749 | likely_benign | 0.2674 | benign | 0.322 | Stabilizing | 0.999 | D | 0.624 | neutral | N | 0.507194655 | None | None | I |
K/N | 0.6429 | likely_pathogenic | 0.6145 | pathogenic | 0.262 | Stabilizing | 0.983 | D | 0.683 | prob.neutral | N | 0.455372491 | None | None | I |
K/P | 0.5623 | ambiguous | 0.5366 | ambiguous | 0.207 | Stabilizing | 0.033 | N | 0.434 | neutral | None | None | None | None | I |
K/Q | 0.1829 | likely_benign | 0.1845 | benign | 0.031 | Stabilizing | 0.983 | D | 0.691 | prob.neutral | N | 0.510656247 | None | None | I |
K/R | 0.0769 | likely_benign | 0.0798 | benign | 0.009 | Stabilizing | 0.944 | D | 0.555 | neutral | N | 0.475196879 | None | None | I |
K/S | 0.5867 | likely_pathogenic | 0.5609 | ambiguous | -0.299 | Destabilizing | 0.916 | D | 0.603 | neutral | None | None | None | None | I |
K/T | 0.3095 | likely_benign | 0.2848 | benign | -0.143 | Destabilizing | 0.967 | D | 0.585 | neutral | N | 0.484701797 | None | None | I |
K/V | 0.3106 | likely_benign | 0.3058 | benign | 0.207 | Stabilizing | 0.987 | D | 0.597 | neutral | None | None | None | None | I |
K/W | 0.8371 | likely_pathogenic | 0.8374 | pathogenic | -0.355 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | I |
K/Y | 0.7427 | likely_pathogenic | 0.7321 | pathogenic | 0.009 | Stabilizing | 0.996 | D | 0.646 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.