Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25041 | 75346;75347;75348 | chr2:178571011;178571010;178571009 | chr2:179435738;179435737;179435736 |
N2AB | 23400 | 70423;70424;70425 | chr2:178571011;178571010;178571009 | chr2:179435738;179435737;179435736 |
N2A | 22473 | 67642;67643;67644 | chr2:178571011;178571010;178571009 | chr2:179435738;179435737;179435736 |
N2B | 15976 | 48151;48152;48153 | chr2:178571011;178571010;178571009 | chr2:179435738;179435737;179435736 |
Novex-1 | 16101 | 48526;48527;48528 | chr2:178571011;178571010;178571009 | chr2:179435738;179435737;179435736 |
Novex-2 | 16168 | 48727;48728;48729 | chr2:178571011;178571010;178571009 | chr2:179435738;179435737;179435736 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs375688406 | -1.946 | 1.0 | D | 0.863 | 0.822 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs375688406 | -1.946 | 1.0 | D | 0.863 | 0.822 | None | gnomAD-4.0.0 | 4.06038E-06 | None | None | None | None | N | None | 6.99276E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.998 | likely_pathogenic | 0.9976 | pathogenic | -3.404 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Y/C | 0.9355 | likely_pathogenic | 0.9281 | pathogenic | -1.789 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.654375286 | None | None | N |
Y/D | 0.9976 | likely_pathogenic | 0.9971 | pathogenic | -3.829 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | D | 0.65457709 | None | None | N |
Y/E | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -3.606 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
Y/F | 0.3031 | likely_benign | 0.2871 | benign | -1.378 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.511254047 | None | None | N |
Y/G | 0.9929 | likely_pathogenic | 0.9923 | pathogenic | -3.816 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | N |
Y/H | 0.9876 | likely_pathogenic | 0.985 | pathogenic | -2.625 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | D | 0.637921956 | None | None | N |
Y/I | 0.9841 | likely_pathogenic | 0.9791 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Y/K | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -2.426 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/L | 0.9615 | likely_pathogenic | 0.9539 | pathogenic | -2.008 | Highly Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
Y/M | 0.9877 | likely_pathogenic | 0.9854 | pathogenic | -1.707 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Y/N | 0.9809 | likely_pathogenic | 0.9788 | pathogenic | -3.261 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.65457709 | None | None | N |
Y/P | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -2.493 | Highly Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | N |
Y/Q | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -2.97 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Y/R | 0.9973 | likely_pathogenic | 0.9969 | pathogenic | -2.262 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
Y/S | 0.9909 | likely_pathogenic | 0.99 | pathogenic | -3.527 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.638325564 | None | None | N |
Y/T | 0.9976 | likely_pathogenic | 0.997 | pathogenic | -3.182 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
Y/V | 0.9736 | likely_pathogenic | 0.9658 | pathogenic | -2.493 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Y/W | 0.8786 | likely_pathogenic | 0.8813 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.