Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25045 | 75358;75359;75360 | chr2:178570999;178570998;178570997 | chr2:179435726;179435725;179435724 |
N2AB | 23404 | 70435;70436;70437 | chr2:178570999;178570998;178570997 | chr2:179435726;179435725;179435724 |
N2A | 22477 | 67654;67655;67656 | chr2:178570999;178570998;178570997 | chr2:179435726;179435725;179435724 |
N2B | 15980 | 48163;48164;48165 | chr2:178570999;178570998;178570997 | chr2:179435726;179435725;179435724 |
Novex-1 | 16105 | 48538;48539;48540 | chr2:178570999;178570998;178570997 | chr2:179435726;179435725;179435724 |
Novex-2 | 16172 | 48739;48740;48741 | chr2:178570999;178570998;178570997 | chr2:179435726;179435725;179435724 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1275374951 | -2.182 | 0.981 | N | 0.719 | 0.375 | 0.296329037015 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1275374951 | -2.182 | 0.981 | N | 0.719 | 0.375 | 0.296329037015 | gnomAD-4.0.0 | 4.1063E-06 | None | None | None | None | N | None | 0 | 6.70811E-05 | None | 0 | 0 | None | 0 | 0 | 1.79939E-06 | 0 | 1.65706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9344 | likely_pathogenic | 0.9372 | pathogenic | -1.505 | Destabilizing | 0.845 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/C | 0.8701 | likely_pathogenic | 0.8697 | pathogenic | -1.655 | Destabilizing | 0.073 | N | 0.67 | neutral | None | None | None | None | N |
K/D | 0.9919 | likely_pathogenic | 0.9912 | pathogenic | -2.533 | Highly Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | N |
K/E | 0.8488 | likely_pathogenic | 0.8464 | pathogenic | -2.2 | Highly Destabilizing | 0.981 | D | 0.719 | prob.delet. | N | 0.494094622 | None | None | N |
K/F | 0.9684 | likely_pathogenic | 0.9653 | pathogenic | -0.626 | Destabilizing | 0.987 | D | 0.843 | deleterious | None | None | None | None | N |
K/G | 0.9491 | likely_pathogenic | 0.9475 | pathogenic | -1.997 | Destabilizing | 0.987 | D | 0.78 | deleterious | None | None | None | None | N |
K/H | 0.7504 | likely_pathogenic | 0.7383 | pathogenic | -1.736 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
K/I | 0.8686 | likely_pathogenic | 0.8711 | pathogenic | -0.079 | Destabilizing | 0.975 | D | 0.833 | deleterious | None | None | None | None | N |
K/L | 0.799 | likely_pathogenic | 0.7987 | pathogenic | -0.079 | Destabilizing | 0.845 | D | 0.754 | deleterious | None | None | None | None | N |
K/M | 0.5466 | ambiguous | 0.5481 | ambiguous | -0.511 | Destabilizing | 0.999 | D | 0.796 | deleterious | N | 0.483579581 | None | None | N |
K/N | 0.959 | likely_pathogenic | 0.9564 | pathogenic | -2.26 | Highly Destabilizing | 0.994 | D | 0.804 | deleterious | N | 0.505450927 | None | None | N |
K/P | 0.9985 | likely_pathogenic | 0.9986 | pathogenic | -0.538 | Destabilizing | 0.996 | D | 0.816 | deleterious | None | None | None | None | N |
K/Q | 0.4283 | ambiguous | 0.4357 | ambiguous | -1.793 | Destabilizing | 0.994 | D | 0.825 | deleterious | N | 0.473521605 | None | None | N |
K/R | 0.1034 | likely_benign | 0.105 | benign | -1.213 | Destabilizing | 0.981 | D | 0.715 | prob.delet. | N | 0.433766836 | None | None | N |
K/S | 0.9475 | likely_pathogenic | 0.9485 | pathogenic | -2.677 | Highly Destabilizing | 0.916 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/T | 0.836 | likely_pathogenic | 0.833 | pathogenic | -2.088 | Highly Destabilizing | 0.967 | D | 0.77 | deleterious | N | 0.468962475 | None | None | N |
K/V | 0.8111 | likely_pathogenic | 0.8151 | pathogenic | -0.538 | Destabilizing | 0.975 | D | 0.779 | deleterious | None | None | None | None | N |
K/W | 0.9392 | likely_pathogenic | 0.9295 | pathogenic | -0.787 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
K/Y | 0.861 | likely_pathogenic | 0.8387 | pathogenic | -0.448 | Destabilizing | 0.996 | D | 0.83 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.