Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25046 | 75361;75362;75363 | chr2:178570996;178570995;178570994 | chr2:179435723;179435722;179435721 |
N2AB | 23405 | 70438;70439;70440 | chr2:178570996;178570995;178570994 | chr2:179435723;179435722;179435721 |
N2A | 22478 | 67657;67658;67659 | chr2:178570996;178570995;178570994 | chr2:179435723;179435722;179435721 |
N2B | 15981 | 48166;48167;48168 | chr2:178570996;178570995;178570994 | chr2:179435723;179435722;179435721 |
Novex-1 | 16106 | 48541;48542;48543 | chr2:178570996;178570995;178570994 | chr2:179435723;179435722;179435721 |
Novex-2 | 16173 | 48742;48743;48744 | chr2:178570996;178570995;178570994 | chr2:179435723;179435722;179435721 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.805 | N | 0.457 | 0.228 | 0.260735089382 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
K/R | None | None | 0.025 | N | 0.381 | 0.1 | 0.27855597813 | gnomAD-4.0.0 | 1.36871E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79931E-06 | 0 | 0 |
K/T | rs759445513 | -1.796 | 0.967 | N | 0.659 | 0.396 | 0.363356657567 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9039 | likely_pathogenic | 0.8853 | pathogenic | -1.453 | Destabilizing | 0.916 | D | 0.507 | neutral | None | None | None | None | N |
K/C | 0.8445 | likely_pathogenic | 0.8394 | pathogenic | -1.436 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
K/D | 0.9874 | likely_pathogenic | 0.9855 | pathogenic | -1.596 | Destabilizing | 0.975 | D | 0.657 | neutral | None | None | None | None | N |
K/E | 0.7687 | likely_pathogenic | 0.7428 | pathogenic | -1.323 | Destabilizing | 0.805 | D | 0.457 | neutral | N | 0.515363926 | None | None | N |
K/F | 0.9801 | likely_pathogenic | 0.979 | pathogenic | -0.707 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
K/G | 0.9413 | likely_pathogenic | 0.9322 | pathogenic | -1.901 | Destabilizing | 0.916 | D | 0.649 | neutral | None | None | None | None | N |
K/H | 0.7352 | likely_pathogenic | 0.7208 | pathogenic | -1.927 | Destabilizing | 0.997 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/I | 0.8959 | likely_pathogenic | 0.8955 | pathogenic | -0.19 | Destabilizing | 0.983 | D | 0.825 | deleterious | N | 0.495869049 | None | None | N |
K/L | 0.7422 | likely_pathogenic | 0.7331 | pathogenic | -0.19 | Destabilizing | 0.916 | D | 0.649 | neutral | None | None | None | None | N |
K/M | 0.5654 | likely_pathogenic | 0.5333 | ambiguous | -0.618 | Destabilizing | 0.997 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/N | 0.9374 | likely_pathogenic | 0.9315 | pathogenic | -1.554 | Destabilizing | 0.967 | D | 0.557 | neutral | N | 0.480727308 | None | None | N |
K/P | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -0.591 | Destabilizing | 0.987 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/Q | 0.3571 | ambiguous | 0.3367 | benign | -1.269 | Destabilizing | 0.204 | N | 0.302 | neutral | N | 0.482616789 | None | None | N |
K/R | 0.0808 | likely_benign | 0.0816 | benign | -0.985 | Destabilizing | 0.025 | N | 0.381 | neutral | N | 0.402366494 | None | None | N |
K/S | 0.9561 | likely_pathogenic | 0.9479 | pathogenic | -2.103 | Highly Destabilizing | 0.916 | D | 0.497 | neutral | None | None | None | None | N |
K/T | 0.8492 | likely_pathogenic | 0.8274 | pathogenic | -1.592 | Destabilizing | 0.967 | D | 0.659 | neutral | N | 0.489032194 | None | None | N |
K/V | 0.854 | likely_pathogenic | 0.8496 | pathogenic | -0.591 | Destabilizing | 0.975 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/W | 0.9608 | likely_pathogenic | 0.9613 | pathogenic | -0.741 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/Y | 0.9267 | likely_pathogenic | 0.9233 | pathogenic | -0.391 | Destabilizing | 0.996 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.