Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25049 | 75370;75371;75372 | chr2:178570987;178570986;178570985 | chr2:179435714;179435713;179435712 |
N2AB | 23408 | 70447;70448;70449 | chr2:178570987;178570986;178570985 | chr2:179435714;179435713;179435712 |
N2A | 22481 | 67666;67667;67668 | chr2:178570987;178570986;178570985 | chr2:179435714;179435713;179435712 |
N2B | 15984 | 48175;48176;48177 | chr2:178570987;178570986;178570985 | chr2:179435714;179435713;179435712 |
Novex-1 | 16109 | 48550;48551;48552 | chr2:178570987;178570986;178570985 | chr2:179435714;179435713;179435712 |
Novex-2 | 16176 | 48751;48752;48753 | chr2:178570987;178570986;178570985 | chr2:179435714;179435713;179435712 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1268559382 | None | 0.616 | N | 0.413 | 0.208 | 0.1749357433 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs1268559382 | None | 0.616 | N | 0.413 | 0.208 | 0.1749357433 | gnomAD-4.0.0 | 6.57938E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47115E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2751 | likely_benign | 0.2387 | benign | -0.397 | Destabilizing | 0.01 | N | 0.304 | neutral | N | 0.457803197 | None | None | N |
P/C | 0.8588 | likely_pathogenic | 0.826 | pathogenic | -0.845 | Destabilizing | 0.991 | D | 0.622 | neutral | None | None | None | None | N |
P/D | 0.724 | likely_pathogenic | 0.6706 | pathogenic | -0.49 | Destabilizing | 0.968 | D | 0.452 | neutral | None | None | None | None | N |
P/E | 0.5947 | likely_pathogenic | 0.5329 | ambiguous | -0.6 | Destabilizing | 0.937 | D | 0.41 | neutral | None | None | None | None | N |
P/F | 0.8834 | likely_pathogenic | 0.852 | pathogenic | -0.698 | Destabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | N |
P/G | 0.4595 | ambiguous | 0.4173 | ambiguous | -0.474 | Destabilizing | 0.68 | D | 0.421 | neutral | None | None | None | None | N |
P/H | 0.5981 | likely_pathogenic | 0.5422 | ambiguous | 0.016 | Stabilizing | 0.996 | D | 0.551 | neutral | N | 0.453397482 | None | None | N |
P/I | 0.7717 | likely_pathogenic | 0.7235 | pathogenic | -0.336 | Destabilizing | 0.937 | D | 0.611 | neutral | None | None | None | None | N |
P/K | 0.6913 | likely_pathogenic | 0.6519 | pathogenic | -0.501 | Destabilizing | 0.937 | D | 0.419 | neutral | None | None | None | None | N |
P/L | 0.3921 | ambiguous | 0.3404 | ambiguous | -0.336 | Destabilizing | 0.849 | D | 0.509 | neutral | N | 0.456044055 | None | None | N |
P/M | 0.701 | likely_pathogenic | 0.6416 | pathogenic | -0.627 | Destabilizing | 0.997 | D | 0.552 | neutral | None | None | None | None | N |
P/N | 0.6812 | likely_pathogenic | 0.63 | pathogenic | -0.333 | Destabilizing | 0.968 | D | 0.54 | neutral | None | None | None | None | N |
P/Q | 0.5163 | ambiguous | 0.4584 | ambiguous | -0.551 | Destabilizing | 0.968 | D | 0.481 | neutral | None | None | None | None | N |
P/R | 0.5531 | ambiguous | 0.5053 | ambiguous | -0.004 | Destabilizing | 0.958 | D | 0.539 | neutral | N | 0.487606029 | None | None | N |
P/S | 0.3851 | ambiguous | 0.3374 | benign | -0.629 | Destabilizing | 0.616 | D | 0.413 | neutral | N | 0.469806915 | None | None | N |
P/T | 0.3184 | likely_benign | 0.2742 | benign | -0.648 | Destabilizing | 0.762 | D | 0.405 | neutral | N | 0.487432671 | None | None | N |
P/V | 0.6162 | likely_pathogenic | 0.5599 | ambiguous | -0.327 | Destabilizing | 0.68 | D | 0.411 | neutral | None | None | None | None | N |
P/W | 0.914 | likely_pathogenic | 0.887 | pathogenic | -0.755 | Destabilizing | 0.997 | D | 0.691 | prob.neutral | None | None | None | None | N |
P/Y | 0.8457 | likely_pathogenic | 0.8059 | pathogenic | -0.489 | Destabilizing | 0.997 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.