Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25054 | 75385;75386;75387 | chr2:178570972;178570971;178570970 | chr2:179435699;179435698;179435697 |
N2AB | 23413 | 70462;70463;70464 | chr2:178570972;178570971;178570970 | chr2:179435699;179435698;179435697 |
N2A | 22486 | 67681;67682;67683 | chr2:178570972;178570971;178570970 | chr2:179435699;179435698;179435697 |
N2B | 15989 | 48190;48191;48192 | chr2:178570972;178570971;178570970 | chr2:179435699;179435698;179435697 |
Novex-1 | 16114 | 48565;48566;48567 | chr2:178570972;178570971;178570970 | chr2:179435699;179435698;179435697 |
Novex-2 | 16181 | 48766;48767;48768 | chr2:178570972;178570971;178570970 | chr2:179435699;179435698;179435697 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1410088991 | 0.263 | 0.007 | N | 0.164 | 0.117 | 0.377097596864 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.7839 | likely_pathogenic | 0.7676 | pathogenic | -1.491 | Destabilizing | 0.543 | D | 0.425 | neutral | None | None | None | None | I |
M/C | 0.8694 | likely_pathogenic | 0.8619 | pathogenic | -1.072 | Destabilizing | 0.996 | D | 0.402 | neutral | None | None | None | None | I |
M/D | 0.9726 | likely_pathogenic | 0.9703 | pathogenic | -0.383 | Destabilizing | 0.984 | D | 0.417 | neutral | None | None | None | None | I |
M/E | 0.7879 | likely_pathogenic | 0.7981 | pathogenic | -0.369 | Destabilizing | 0.984 | D | 0.395 | neutral | None | None | None | None | I |
M/F | 0.6232 | likely_pathogenic | 0.5987 | pathogenic | -0.553 | Destabilizing | 0.742 | D | 0.404 | neutral | None | None | None | None | I |
M/G | 0.8798 | likely_pathogenic | 0.8652 | pathogenic | -1.781 | Destabilizing | 0.953 | D | 0.395 | neutral | None | None | None | None | I |
M/H | 0.8077 | likely_pathogenic | 0.8026 | pathogenic | -0.822 | Destabilizing | 0.996 | D | 0.416 | neutral | None | None | None | None | I |
M/I | 0.5644 | likely_pathogenic | 0.5333 | ambiguous | -0.759 | Destabilizing | 0.007 | N | 0.164 | neutral | N | 0.442833745 | None | None | I |
M/K | 0.4858 | ambiguous | 0.4913 | ambiguous | -0.437 | Destabilizing | 0.815 | D | 0.385 | neutral | N | 0.430635239 | None | None | I |
M/L | 0.1665 | likely_benign | 0.1582 | benign | -0.759 | Destabilizing | 0.028 | N | 0.229 | neutral | N | 0.484872368 | None | None | I |
M/N | 0.7727 | likely_pathogenic | 0.766 | pathogenic | -0.281 | Destabilizing | 0.984 | D | 0.42 | neutral | None | None | None | None | I |
M/P | 0.9898 | likely_pathogenic | 0.9878 | pathogenic | -0.976 | Destabilizing | 0.984 | D | 0.421 | neutral | None | None | None | None | I |
M/Q | 0.4115 | ambiguous | 0.4158 | ambiguous | -0.385 | Destabilizing | 0.984 | D | 0.425 | neutral | None | None | None | None | I |
M/R | 0.5096 | ambiguous | 0.5119 | ambiguous | 0.083 | Stabilizing | 0.979 | D | 0.412 | neutral | N | 0.467518759 | None | None | I |
M/S | 0.7512 | likely_pathogenic | 0.7429 | pathogenic | -0.86 | Destabilizing | 0.854 | D | 0.384 | neutral | None | None | None | None | I |
M/T | 0.5303 | ambiguous | 0.5268 | ambiguous | -0.74 | Destabilizing | 0.684 | D | 0.372 | neutral | N | 0.459917996 | None | None | I |
M/V | 0.1844 | likely_benign | 0.1716 | benign | -0.976 | Destabilizing | 0.063 | N | 0.285 | neutral | N | 0.444025824 | None | None | I |
M/W | 0.8722 | likely_pathogenic | 0.8648 | pathogenic | -0.483 | Destabilizing | 0.996 | D | 0.422 | neutral | None | None | None | None | I |
M/Y | 0.8131 | likely_pathogenic | 0.8048 | pathogenic | -0.497 | Destabilizing | 0.953 | D | 0.408 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.