Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25061 | 75406;75407;75408 | chr2:178570951;178570950;178570949 | chr2:179435678;179435677;179435676 |
N2AB | 23420 | 70483;70484;70485 | chr2:178570951;178570950;178570949 | chr2:179435678;179435677;179435676 |
N2A | 22493 | 67702;67703;67704 | chr2:178570951;178570950;178570949 | chr2:179435678;179435677;179435676 |
N2B | 15996 | 48211;48212;48213 | chr2:178570951;178570950;178570949 | chr2:179435678;179435677;179435676 |
Novex-1 | 16121 | 48586;48587;48588 | chr2:178570951;178570950;178570949 | chr2:179435678;179435677;179435676 |
Novex-2 | 16188 | 48787;48788;48789 | chr2:178570951;178570950;178570949 | chr2:179435678;179435677;179435676 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1455981724 | -2.046 | 0.062 | N | 0.559 | 0.226 | 0.558966020747 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
I/T | rs1455981724 | -2.046 | 0.062 | N | 0.559 | 0.226 | 0.558966020747 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.792 | likely_pathogenic | 0.7846 | pathogenic | -1.858 | Destabilizing | 0.035 | N | 0.533 | neutral | None | None | None | None | N |
I/C | 0.8481 | likely_pathogenic | 0.8366 | pathogenic | -1.116 | Destabilizing | 0.824 | D | 0.573 | neutral | None | None | None | None | N |
I/D | 0.977 | likely_pathogenic | 0.974 | pathogenic | -1.731 | Destabilizing | 0.555 | D | 0.651 | neutral | None | None | None | None | N |
I/E | 0.9557 | likely_pathogenic | 0.9509 | pathogenic | -1.49 | Destabilizing | 0.555 | D | 0.647 | neutral | None | None | None | None | N |
I/F | 0.7282 | likely_pathogenic | 0.7201 | pathogenic | -0.989 | Destabilizing | 0.317 | N | 0.62 | neutral | N | 0.478570807 | None | None | N |
I/G | 0.9516 | likely_pathogenic | 0.9487 | pathogenic | -2.41 | Highly Destabilizing | 0.555 | D | 0.649 | neutral | None | None | None | None | N |
I/H | 0.9411 | likely_pathogenic | 0.9351 | pathogenic | -2.008 | Highly Destabilizing | 0.935 | D | 0.61 | neutral | None | None | None | None | N |
I/K | 0.9192 | likely_pathogenic | 0.9133 | pathogenic | -1.082 | Destabilizing | 0.38 | N | 0.647 | neutral | None | None | None | None | N |
I/L | 0.2956 | likely_benign | 0.283 | benign | -0.278 | Destabilizing | 0.004 | N | 0.394 | neutral | N | 0.511283471 | None | None | N |
I/M | 0.3047 | likely_benign | 0.2912 | benign | -0.368 | Destabilizing | 0.012 | N | 0.403 | neutral | N | 0.492409101 | None | None | N |
I/N | 0.7619 | likely_pathogenic | 0.7409 | pathogenic | -1.418 | Destabilizing | 0.484 | N | 0.663 | neutral | N | 0.471974215 | None | None | N |
I/P | 0.9752 | likely_pathogenic | 0.9745 | pathogenic | -0.783 | Destabilizing | 0.555 | D | 0.661 | neutral | None | None | None | None | N |
I/Q | 0.9266 | likely_pathogenic | 0.9211 | pathogenic | -1.206 | Destabilizing | 0.555 | D | 0.661 | neutral | None | None | None | None | N |
I/R | 0.8969 | likely_pathogenic | 0.8862 | pathogenic | -1.084 | Destabilizing | 0.555 | D | 0.661 | neutral | None | None | None | None | N |
I/S | 0.787 | likely_pathogenic | 0.7716 | pathogenic | -2.154 | Highly Destabilizing | 0.117 | N | 0.597 | neutral | N | 0.498100743 | None | None | N |
I/T | 0.6043 | likely_pathogenic | 0.5938 | pathogenic | -1.755 | Destabilizing | 0.062 | N | 0.559 | neutral | N | 0.509435244 | None | None | N |
I/V | 0.0596 | likely_benign | 0.0622 | benign | -0.783 | Destabilizing | None | N | 0.196 | neutral | N | 0.408503033 | None | None | N |
I/W | 0.9893 | likely_pathogenic | 0.9886 | pathogenic | -1.366 | Destabilizing | 0.935 | D | 0.641 | neutral | None | None | None | None | N |
I/Y | 0.9434 | likely_pathogenic | 0.9357 | pathogenic | -0.988 | Destabilizing | 0.555 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.