Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25062 | 75409;75410;75411 | chr2:178570948;178570947;178570946 | chr2:179435675;179435674;179435673 |
N2AB | 23421 | 70486;70487;70488 | chr2:178570948;178570947;178570946 | chr2:179435675;179435674;179435673 |
N2A | 22494 | 67705;67706;67707 | chr2:178570948;178570947;178570946 | chr2:179435675;179435674;179435673 |
N2B | 15997 | 48214;48215;48216 | chr2:178570948;178570947;178570946 | chr2:179435675;179435674;179435673 |
Novex-1 | 16122 | 48589;48590;48591 | chr2:178570948;178570947;178570946 | chr2:179435675;179435674;179435673 |
Novex-2 | 16189 | 48790;48791;48792 | chr2:178570948;178570947;178570946 | chr2:179435675;179435674;179435673 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.379 | N | 0.394 | 0.183 | 0.661538273795 | gnomAD-4.0.0 | 6.84288E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99572E-07 | 0 | 0 |
I/T | rs1010492126 | -0.354 | 0.016 | N | 0.233 | 0.143 | 0.453214075403 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/T | rs1010492126 | -0.354 | 0.016 | N | 0.233 | 0.143 | 0.453214075403 | gnomAD-4.0.0 | 2.05286E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99572E-07 | 2.31879E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1751 | likely_benign | 0.1899 | benign | -0.574 | Destabilizing | 0.25 | N | 0.37 | neutral | None | None | None | None | I |
I/C | 0.6813 | likely_pathogenic | 0.71 | pathogenic | -0.683 | Destabilizing | 0.992 | D | 0.373 | neutral | None | None | None | None | I |
I/D | 0.7127 | likely_pathogenic | 0.7493 | pathogenic | 0.053 | Stabilizing | 0.92 | D | 0.399 | neutral | None | None | None | None | I |
I/E | 0.561 | ambiguous | 0.6072 | pathogenic | -0.031 | Destabilizing | 0.92 | D | 0.385 | neutral | None | None | None | None | I |
I/F | 0.2166 | likely_benign | 0.2216 | benign | -0.545 | Destabilizing | 0.81 | D | 0.389 | neutral | N | 0.502010626 | None | None | I |
I/G | 0.4972 | ambiguous | 0.5226 | ambiguous | -0.735 | Destabilizing | 0.92 | D | 0.371 | neutral | None | None | None | None | I |
I/H | 0.509 | ambiguous | 0.5413 | ambiguous | 0.017 | Stabilizing | 0.992 | D | 0.376 | neutral | None | None | None | None | I |
I/K | 0.3794 | ambiguous | 0.4088 | ambiguous | -0.272 | Destabilizing | 0.85 | D | 0.371 | neutral | None | None | None | None | I |
I/L | 0.088 | likely_benign | 0.091 | benign | -0.274 | Destabilizing | 0.002 | N | 0.105 | neutral | N | 0.431841252 | None | None | I |
I/M | 0.0817 | likely_benign | 0.0876 | benign | -0.395 | Destabilizing | 0.036 | N | 0.269 | neutral | N | 0.517094722 | None | None | I |
I/N | 0.3038 | likely_benign | 0.3148 | benign | -0.123 | Destabilizing | 0.896 | D | 0.405 | neutral | N | 0.449464221 | None | None | I |
I/P | 0.3569 | ambiguous | 0.388 | ambiguous | -0.341 | Destabilizing | 0.972 | D | 0.402 | neutral | None | None | None | None | I |
I/Q | 0.384 | ambiguous | 0.4229 | ambiguous | -0.315 | Destabilizing | 0.92 | D | 0.393 | neutral | None | None | None | None | I |
I/R | 0.2857 | likely_benign | 0.3091 | benign | 0.245 | Stabilizing | 0.85 | D | 0.405 | neutral | None | None | None | None | I |
I/S | 0.2211 | likely_benign | 0.2274 | benign | -0.614 | Destabilizing | 0.379 | N | 0.394 | neutral | N | 0.439055226 | None | None | I |
I/T | 0.1023 | likely_benign | 0.1034 | benign | -0.585 | Destabilizing | 0.016 | N | 0.233 | neutral | N | 0.42687815 | None | None | I |
I/V | 0.0924 | likely_benign | 0.095 | benign | -0.341 | Destabilizing | 0.099 | N | 0.271 | neutral | N | 0.481192637 | None | None | I |
I/W | 0.7227 | likely_pathogenic | 0.7531 | pathogenic | -0.554 | Destabilizing | 0.992 | D | 0.427 | neutral | None | None | None | None | I |
I/Y | 0.584 | likely_pathogenic | 0.608 | pathogenic | -0.306 | Destabilizing | 0.92 | D | 0.396 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.