Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25063 | 75412;75413;75414 | chr2:178570945;178570944;178570943 | chr2:179435672;179435671;179435670 |
N2AB | 23422 | 70489;70490;70491 | chr2:178570945;178570944;178570943 | chr2:179435672;179435671;179435670 |
N2A | 22495 | 67708;67709;67710 | chr2:178570945;178570944;178570943 | chr2:179435672;179435671;179435670 |
N2B | 15998 | 48217;48218;48219 | chr2:178570945;178570944;178570943 | chr2:179435672;179435671;179435670 |
Novex-1 | 16123 | 48592;48593;48594 | chr2:178570945;178570944;178570943 | chr2:179435672;179435671;179435670 |
Novex-2 | 16190 | 48793;48794;48795 | chr2:178570945;178570944;178570943 | chr2:179435672;179435671;179435670 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs1707970781 | None | 0.602 | N | 0.329 | 0.259 | 0.190952846119 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85928E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1879 | likely_benign | 0.2172 | benign | -0.215 | Destabilizing | 0.042 | N | 0.322 | neutral | N | 0.460510721 | None | None | N |
D/C | 0.7254 | likely_pathogenic | 0.7585 | pathogenic | -0.286 | Destabilizing | 0.958 | D | 0.4 | neutral | None | None | None | None | N |
D/E | 0.107 | likely_benign | 0.1215 | benign | -0.509 | Destabilizing | None | N | 0.098 | neutral | N | 0.414989075 | None | None | N |
D/F | 0.7845 | likely_pathogenic | 0.8064 | pathogenic | 0.393 | Stabilizing | 0.497 | N | 0.413 | neutral | None | None | None | None | N |
D/G | 0.1618 | likely_benign | 0.188 | benign | -0.546 | Destabilizing | 0.175 | N | 0.337 | neutral | N | 0.470362355 | None | None | N |
D/H | 0.3511 | ambiguous | 0.3854 | ambiguous | 0.429 | Stabilizing | 0.602 | D | 0.329 | neutral | N | 0.500087829 | None | None | N |
D/I | 0.6132 | likely_pathogenic | 0.6385 | pathogenic | 0.656 | Stabilizing | 0.001 | N | 0.386 | neutral | None | None | None | None | N |
D/K | 0.4195 | ambiguous | 0.464 | ambiguous | -0.199 | Destabilizing | 0.002 | N | 0.185 | neutral | None | None | None | None | N |
D/L | 0.539 | ambiguous | 0.5757 | pathogenic | 0.656 | Stabilizing | 0.02 | N | 0.372 | neutral | None | None | None | None | N |
D/M | 0.7096 | likely_pathogenic | 0.7454 | pathogenic | 0.717 | Stabilizing | 0.497 | N | 0.394 | neutral | None | None | None | None | N |
D/N | 0.1085 | likely_benign | 0.1184 | benign | -0.735 | Destabilizing | 0.175 | N | 0.282 | neutral | N | 0.501586552 | None | None | N |
D/P | 0.8828 | likely_pathogenic | 0.9007 | pathogenic | 0.391 | Stabilizing | 0.364 | N | 0.343 | neutral | None | None | None | None | N |
D/Q | 0.3213 | likely_benign | 0.3662 | ambiguous | -0.577 | Destabilizing | 0.124 | N | 0.245 | neutral | None | None | None | None | N |
D/R | 0.5051 | ambiguous | 0.5419 | ambiguous | 0.172 | Stabilizing | 0.124 | N | 0.336 | neutral | None | None | None | None | N |
D/S | 0.1197 | likely_benign | 0.1372 | benign | -0.934 | Destabilizing | 0.055 | N | 0.262 | neutral | None | None | None | None | N |
D/T | 0.2542 | likely_benign | 0.2854 | benign | -0.654 | Destabilizing | 0.22 | N | 0.316 | neutral | None | None | None | None | N |
D/V | 0.3924 | ambiguous | 0.4111 | ambiguous | 0.391 | Stabilizing | 0.015 | N | 0.362 | neutral | N | 0.494449936 | None | None | N |
D/W | 0.9496 | likely_pathogenic | 0.9568 | pathogenic | 0.58 | Stabilizing | 0.958 | D | 0.441 | neutral | None | None | None | None | N |
D/Y | 0.4481 | ambiguous | 0.4582 | ambiguous | 0.642 | Stabilizing | 0.602 | D | 0.415 | neutral | N | 0.516404076 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.