Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25068 | 75427;75428;75429 | chr2:178570930;178570929;178570928 | chr2:179435657;179435656;179435655 |
N2AB | 23427 | 70504;70505;70506 | chr2:178570930;178570929;178570928 | chr2:179435657;179435656;179435655 |
N2A | 22500 | 67723;67724;67725 | chr2:178570930;178570929;178570928 | chr2:179435657;179435656;179435655 |
N2B | 16003 | 48232;48233;48234 | chr2:178570930;178570929;178570928 | chr2:179435657;179435656;179435655 |
Novex-1 | 16128 | 48607;48608;48609 | chr2:178570930;178570929;178570928 | chr2:179435657;179435656;179435655 |
Novex-2 | 16195 | 48808;48809;48810 | chr2:178570930;178570929;178570928 | chr2:179435657;179435656;179435655 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.553 | 0.236 | 0.546824882953 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85935E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5417 | ambiguous | 0.5426 | ambiguous | -1.594 | Destabilizing | 0.999 | D | 0.642 | neutral | D | 0.523700981 | None | None | N |
V/C | 0.9269 | likely_pathogenic | 0.9316 | pathogenic | -1.304 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/D | 0.9876 | likely_pathogenic | 0.986 | pathogenic | -1.859 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/E | 0.9655 | likely_pathogenic | 0.9637 | pathogenic | -1.586 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.529945327 | None | None | N |
V/F | 0.794 | likely_pathogenic | 0.7778 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
V/G | 0.8467 | likely_pathogenic | 0.8342 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.548049582 | None | None | N |
V/H | 0.9912 | likely_pathogenic | 0.991 | pathogenic | -2.072 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/I | 0.1155 | likely_benign | 0.1082 | benign | 0.064 | Stabilizing | 0.997 | D | 0.553 | neutral | N | 0.485217164 | None | None | N |
V/K | 0.9837 | likely_pathogenic | 0.9818 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/L | 0.654 | likely_pathogenic | 0.6483 | pathogenic | 0.064 | Stabilizing | 0.997 | D | 0.658 | neutral | N | 0.465061681 | None | None | N |
V/M | 0.5519 | ambiguous | 0.5375 | ambiguous | -0.214 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
V/N | 0.9597 | likely_pathogenic | 0.9552 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
V/P | 0.988 | likely_pathogenic | 0.988 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/Q | 0.9726 | likely_pathogenic | 0.9711 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/R | 0.9794 | likely_pathogenic | 0.9772 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/S | 0.8835 | likely_pathogenic | 0.8755 | pathogenic | -2.31 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/T | 0.7522 | likely_pathogenic | 0.748 | pathogenic | -1.858 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
V/W | 0.9959 | likely_pathogenic | 0.9958 | pathogenic | -1.366 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.9705 | likely_pathogenic | 0.9685 | pathogenic | -0.904 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.