Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25072 | 75439;75440;75441 | chr2:178570918;178570917;178570916 | chr2:179435645;179435644;179435643 |
N2AB | 23431 | 70516;70517;70518 | chr2:178570918;178570917;178570916 | chr2:179435645;179435644;179435643 |
N2A | 22504 | 67735;67736;67737 | chr2:178570918;178570917;178570916 | chr2:179435645;179435644;179435643 |
N2B | 16007 | 48244;48245;48246 | chr2:178570918;178570917;178570916 | chr2:179435645;179435644;179435643 |
Novex-1 | 16132 | 48619;48620;48621 | chr2:178570918;178570917;178570916 | chr2:179435645;179435644;179435643 |
Novex-2 | 16199 | 48820;48821;48822 | chr2:178570918;178570917;178570916 | chr2:179435645;179435644;179435643 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1707961422 | None | None | N | 0.082 | 0.126 | 0.238096912614 | gnomAD-4.0.0 | 2.73714E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79916E-06 | 2.31868E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1336 | likely_benign | 0.1136 | benign | -1.353 | Destabilizing | None | N | 0.082 | neutral | N | 0.467455336 | None | None | N |
V/C | 0.7066 | likely_pathogenic | 0.6716 | pathogenic | -0.719 | Destabilizing | 0.824 | D | 0.357 | neutral | None | None | None | None | N |
V/D | 0.4226 | ambiguous | 0.359 | ambiguous | -1.259 | Destabilizing | 0.484 | N | 0.374 | neutral | N | 0.490697555 | None | None | N |
V/E | 0.3161 | likely_benign | 0.2752 | benign | -1.28 | Destabilizing | 0.38 | N | 0.353 | neutral | None | None | None | None | N |
V/F | 0.2145 | likely_benign | 0.1918 | benign | -1.138 | Destabilizing | 0.188 | N | 0.375 | neutral | N | 0.482040786 | None | None | N |
V/G | 0.235 | likely_benign | 0.1969 | benign | -1.639 | Destabilizing | 0.062 | N | 0.372 | neutral | N | 0.470545864 | None | None | N |
V/H | 0.529 | ambiguous | 0.4898 | ambiguous | -1.143 | Destabilizing | 0.935 | D | 0.373 | neutral | None | None | None | None | N |
V/I | 0.077 | likely_benign | 0.0773 | benign | -0.676 | Destabilizing | None | N | 0.087 | neutral | N | 0.442290319 | None | None | N |
V/K | 0.3336 | likely_benign | 0.3034 | benign | -1.113 | Destabilizing | 0.149 | N | 0.354 | neutral | None | None | None | None | N |
V/L | 0.1703 | likely_benign | 0.152 | benign | -0.676 | Destabilizing | None | N | 0.078 | neutral | N | 0.448253499 | None | None | N |
V/M | 0.1277 | likely_benign | 0.1187 | benign | -0.449 | Destabilizing | 0.235 | N | 0.349 | neutral | None | None | None | None | N |
V/N | 0.2471 | likely_benign | 0.2045 | benign | -0.832 | Destabilizing | 0.555 | D | 0.395 | neutral | None | None | None | None | N |
V/P | 0.6424 | likely_pathogenic | 0.5671 | pathogenic | -0.867 | Destabilizing | 0.555 | D | 0.383 | neutral | None | None | None | None | N |
V/Q | 0.2938 | likely_benign | 0.267 | benign | -1.033 | Destabilizing | 0.555 | D | 0.37 | neutral | None | None | None | None | N |
V/R | 0.2922 | likely_benign | 0.2735 | benign | -0.533 | Destabilizing | 0.38 | N | 0.386 | neutral | None | None | None | None | N |
V/S | 0.1655 | likely_benign | 0.1416 | benign | -1.276 | Destabilizing | 0.081 | N | 0.333 | neutral | None | None | None | None | N |
V/T | 0.0989 | likely_benign | 0.0947 | benign | -1.192 | Destabilizing | 0.001 | N | 0.072 | neutral | None | None | None | None | N |
V/W | 0.8159 | likely_pathogenic | 0.7762 | pathogenic | -1.313 | Destabilizing | 0.935 | D | 0.42 | neutral | None | None | None | None | N |
V/Y | 0.589 | likely_pathogenic | 0.5278 | ambiguous | -1.029 | Destabilizing | 0.555 | D | 0.367 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.