Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25081 | 75466;75467;75468 | chr2:178570891;178570890;178570889 | chr2:179435618;179435617;179435616 |
N2AB | 23440 | 70543;70544;70545 | chr2:178570891;178570890;178570889 | chr2:179435618;179435617;179435616 |
N2A | 22513 | 67762;67763;67764 | chr2:178570891;178570890;178570889 | chr2:179435618;179435617;179435616 |
N2B | 16016 | 48271;48272;48273 | chr2:178570891;178570890;178570889 | chr2:179435618;179435617;179435616 |
Novex-1 | 16141 | 48646;48647;48648 | chr2:178570891;178570890;178570889 | chr2:179435618;179435617;179435616 |
Novex-2 | 16208 | 48847;48848;48849 | chr2:178570891;178570890;178570889 | chr2:179435618;179435617;179435616 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.067 | D | 0.327 | 0.248 | 0.326881540566 | gnomAD-4.0.0 | 3.18346E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7689 | likely_pathogenic | 0.7652 | pathogenic | -2.622 | Highly Destabilizing | 0.958 | D | 0.693 | prob.neutral | D | 0.54606066 | None | None | N |
V/C | 0.9495 | likely_pathogenic | 0.9493 | pathogenic | -1.986 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/D | 0.9984 | likely_pathogenic | 0.9979 | pathogenic | -3.272 | Highly Destabilizing | 0.998 | D | 0.901 | deleterious | D | 0.647360344 | None | None | N |
V/E | 0.9949 | likely_pathogenic | 0.9937 | pathogenic | -2.972 | Highly Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
V/F | 0.9518 | likely_pathogenic | 0.9396 | pathogenic | -1.263 | Destabilizing | 0.988 | D | 0.847 | deleterious | D | 0.5508336 | None | None | N |
V/G | 0.9416 | likely_pathogenic | 0.9285 | pathogenic | -3.168 | Highly Destabilizing | 0.994 | D | 0.895 | deleterious | D | 0.647360344 | None | None | N |
V/H | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -2.835 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/I | 0.0996 | likely_benign | 0.0966 | benign | -1.013 | Destabilizing | 0.067 | N | 0.327 | neutral | D | 0.525848357 | None | None | N |
V/K | 0.9976 | likely_pathogenic | 0.997 | pathogenic | -1.912 | Destabilizing | 0.995 | D | 0.883 | deleterious | None | None | None | None | N |
V/L | 0.7764 | likely_pathogenic | 0.7374 | pathogenic | -1.013 | Destabilizing | 0.618 | D | 0.652 | neutral | N | 0.517646375 | None | None | N |
V/M | 0.8049 | likely_pathogenic | 0.7667 | pathogenic | -1.423 | Destabilizing | 0.991 | D | 0.819 | deleterious | None | None | None | None | N |
V/N | 0.9913 | likely_pathogenic | 0.9888 | pathogenic | -2.526 | Highly Destabilizing | 0.998 | D | 0.91 | deleterious | None | None | None | None | N |
V/P | 0.996 | likely_pathogenic | 0.995 | pathogenic | -1.536 | Destabilizing | 0.998 | D | 0.897 | deleterious | None | None | None | None | N |
V/Q | 0.9952 | likely_pathogenic | 0.994 | pathogenic | -2.177 | Highly Destabilizing | 0.998 | D | 0.905 | deleterious | None | None | None | None | N |
V/R | 0.9949 | likely_pathogenic | 0.9939 | pathogenic | -1.972 | Destabilizing | 0.998 | D | 0.912 | deleterious | None | None | None | None | N |
V/S | 0.947 | likely_pathogenic | 0.9399 | pathogenic | -2.997 | Highly Destabilizing | 0.995 | D | 0.887 | deleterious | None | None | None | None | N |
V/T | 0.8984 | likely_pathogenic | 0.8918 | pathogenic | -2.56 | Highly Destabilizing | 0.968 | D | 0.76 | deleterious | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -1.721 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
V/Y | 0.996 | likely_pathogenic | 0.9949 | pathogenic | -1.567 | Destabilizing | 0.995 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.