Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25085 | 75478;75479;75480 | chr2:178570879;178570878;178570877 | chr2:179435606;179435605;179435604 |
N2AB | 23444 | 70555;70556;70557 | chr2:178570879;178570878;178570877 | chr2:179435606;179435605;179435604 |
N2A | 22517 | 67774;67775;67776 | chr2:178570879;178570878;178570877 | chr2:179435606;179435605;179435604 |
N2B | 16020 | 48283;48284;48285 | chr2:178570879;178570878;178570877 | chr2:179435606;179435605;179435604 |
Novex-1 | 16145 | 48658;48659;48660 | chr2:178570879;178570878;178570877 | chr2:179435606;179435605;179435604 |
Novex-2 | 16212 | 48859;48860;48861 | chr2:178570879;178570878;178570877 | chr2:179435606;179435605;179435604 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | None | None | 0.998 | D | 0.795 | 0.519 | 0.675916937895 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9952 | likely_pathogenic | 0.9944 | pathogenic | 0.188 | Stabilizing | 0.938 | D | 0.707 | prob.neutral | None | None | None | None | N |
N/C | 0.9627 | likely_pathogenic | 0.9583 | pathogenic | -0.175 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
N/D | 0.9596 | likely_pathogenic | 0.961 | pathogenic | -2.263 | Highly Destabilizing | 0.958 | D | 0.611 | neutral | D | 0.540250178 | None | None | N |
N/E | 0.9978 | likely_pathogenic | 0.9976 | pathogenic | -2.15 | Highly Destabilizing | 0.968 | D | 0.688 | prob.neutral | None | None | None | None | N |
N/F | 0.9989 | likely_pathogenic | 0.9988 | pathogenic | -0.208 | Destabilizing | 0.995 | D | 0.798 | deleterious | None | None | None | None | N |
N/G | 0.9852 | likely_pathogenic | 0.9817 | pathogenic | -0.058 | Destabilizing | 0.968 | D | 0.581 | neutral | None | None | None | None | N |
N/H | 0.9682 | likely_pathogenic | 0.9636 | pathogenic | -0.089 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | D | 0.542531584 | None | None | N |
N/I | 0.9901 | likely_pathogenic | 0.9887 | pathogenic | 0.765 | Stabilizing | 0.988 | D | 0.803 | deleterious | D | 0.554394868 | None | None | N |
N/K | 0.9977 | likely_pathogenic | 0.9973 | pathogenic | 0.255 | Stabilizing | 0.958 | D | 0.695 | prob.neutral | D | 0.552873931 | None | None | N |
N/L | 0.9755 | likely_pathogenic | 0.9714 | pathogenic | 0.765 | Stabilizing | 0.982 | D | 0.773 | deleterious | None | None | None | None | N |
N/M | 0.9854 | likely_pathogenic | 0.9844 | pathogenic | 0.969 | Stabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
N/P | 0.9974 | likely_pathogenic | 0.9967 | pathogenic | 0.601 | Stabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | N |
N/Q | 0.9977 | likely_pathogenic | 0.9973 | pathogenic | -0.887 | Destabilizing | 0.995 | D | 0.756 | deleterious | None | None | None | None | N |
N/R | 0.9974 | likely_pathogenic | 0.9968 | pathogenic | 0.337 | Stabilizing | 0.991 | D | 0.758 | deleterious | None | None | None | None | N |
N/S | 0.788 | likely_pathogenic | 0.7657 | pathogenic | -0.468 | Destabilizing | 0.919 | D | 0.587 | neutral | N | 0.514890994 | None | None | N |
N/T | 0.881 | likely_pathogenic | 0.8731 | pathogenic | -0.226 | Destabilizing | 0.067 | N | 0.358 | neutral | N | 0.519864517 | None | None | N |
N/V | 0.9868 | likely_pathogenic | 0.9847 | pathogenic | 0.601 | Stabilizing | 0.982 | D | 0.785 | deleterious | None | None | None | None | N |
N/W | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
N/Y | 0.9896 | likely_pathogenic | 0.9884 | pathogenic | 0.217 | Stabilizing | 0.998 | D | 0.795 | deleterious | D | 0.553887889 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.