Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2509 | 7750;7751;7752 | chr2:178773531;178773530;178773529 | chr2:179638258;179638257;179638256 |
N2AB | 2509 | 7750;7751;7752 | chr2:178773531;178773530;178773529 | chr2:179638258;179638257;179638256 |
N2A | 2509 | 7750;7751;7752 | chr2:178773531;178773530;178773529 | chr2:179638258;179638257;179638256 |
N2B | 2463 | 7612;7613;7614 | chr2:178773531;178773530;178773529 | chr2:179638258;179638257;179638256 |
Novex-1 | 2463 | 7612;7613;7614 | chr2:178773531;178773530;178773529 | chr2:179638258;179638257;179638256 |
Novex-2 | 2463 | 7612;7613;7614 | chr2:178773531;178773530;178773529 | chr2:179638258;179638257;179638256 |
Novex-3 | 2509 | 7750;7751;7752 | chr2:178773531;178773530;178773529 | chr2:179638258;179638257;179638256 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.999 | N | 0.589 | 0.263 | 0.291694819147 | gnomAD-4.0.0 | 1.59071E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85672E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5378 | ambiguous | 0.5277 | ambiguous | -0.747 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
A/D | 0.3568 | ambiguous | 0.3368 | benign | -0.627 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.450559534 | None | None | N |
A/E | 0.2967 | likely_benign | 0.2849 | benign | -0.788 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
A/F | 0.3106 | likely_benign | 0.2927 | benign | -1.041 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/G | 0.1464 | likely_benign | 0.1458 | benign | -0.48 | Destabilizing | 0.275 | N | 0.336 | neutral | N | 0.476253081 | None | None | N |
A/H | 0.5027 | ambiguous | 0.4881 | ambiguous | -0.509 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
A/I | 0.2623 | likely_benign | 0.2485 | benign | -0.463 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
A/K | 0.4421 | ambiguous | 0.4219 | ambiguous | -0.705 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
A/L | 0.2176 | likely_benign | 0.2021 | benign | -0.463 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
A/M | 0.2915 | likely_benign | 0.2756 | benign | -0.374 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/N | 0.3395 | likely_benign | 0.3237 | benign | -0.341 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
A/P | 0.2854 | likely_benign | 0.2794 | benign | -0.415 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.436890204 | None | None | N |
A/Q | 0.3688 | ambiguous | 0.3606 | ambiguous | -0.673 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
A/R | 0.3808 | ambiguous | 0.3637 | ambiguous | -0.194 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/S | 0.1066 | likely_benign | 0.1053 | benign | -0.543 | Destabilizing | 0.992 | D | 0.448 | neutral | N | 0.450447973 | None | None | N |
A/T | 0.1204 | likely_benign | 0.1159 | benign | -0.631 | Destabilizing | 0.999 | D | 0.63 | neutral | N | 0.448451498 | None | None | N |
A/V | 0.1497 | likely_benign | 0.1428 | benign | -0.415 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.447326939 | None | None | N |
A/W | 0.742 | likely_pathogenic | 0.7285 | pathogenic | -1.154 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
A/Y | 0.4516 | ambiguous | 0.44 | ambiguous | -0.815 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.