Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25095 | 75508;75509;75510 | chr2:178570849;178570848;178570847 | chr2:179435576;179435575;179435574 |
N2AB | 23454 | 70585;70586;70587 | chr2:178570849;178570848;178570847 | chr2:179435576;179435575;179435574 |
N2A | 22527 | 67804;67805;67806 | chr2:178570849;178570848;178570847 | chr2:179435576;179435575;179435574 |
N2B | 16030 | 48313;48314;48315 | chr2:178570849;178570848;178570847 | chr2:179435576;179435575;179435574 |
Novex-1 | 16155 | 48688;48689;48690 | chr2:178570849;178570848;178570847 | chr2:179435576;179435575;179435574 |
Novex-2 | 16222 | 48889;48890;48891 | chr2:178570849;178570848;178570847 | chr2:179435576;179435575;179435574 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.799 | N | 0.595 | 0.355 | 0.336155897331 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | None | None | 0.799 | N | 0.563 | 0.179 | 0.265929055128 | gnomAD-4.0.0 | 1.59174E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1647 | likely_benign | 0.1411 | benign | -0.381 | Destabilizing | 0.799 | D | 0.59 | neutral | N | 0.514448701 | None | None | N |
E/C | 0.8223 | likely_pathogenic | 0.7959 | pathogenic | 0.106 | Stabilizing | 0.998 | D | 0.828 | deleterious | None | None | None | None | N |
E/D | 0.1123 | likely_benign | 0.0977 | benign | -0.264 | Destabilizing | 0.002 | N | 0.151 | neutral | N | 0.459710139 | None | None | N |
E/F | 0.7073 | likely_pathogenic | 0.6619 | pathogenic | -0.353 | Destabilizing | 0.991 | D | 0.793 | deleterious | None | None | None | None | N |
E/G | 0.2411 | likely_benign | 0.2051 | benign | -0.543 | Destabilizing | 0.799 | D | 0.595 | neutral | N | 0.479191647 | None | None | N |
E/H | 0.5056 | ambiguous | 0.4504 | ambiguous | -0.134 | Destabilizing | 0.991 | D | 0.589 | neutral | None | None | None | None | N |
E/I | 0.3138 | likely_benign | 0.2837 | benign | 0.003 | Stabilizing | 0.974 | D | 0.793 | deleterious | None | None | None | None | N |
E/K | 0.1868 | likely_benign | 0.1652 | benign | 0.525 | Stabilizing | 0.799 | D | 0.563 | neutral | N | 0.463947774 | None | None | N |
E/L | 0.373 | ambiguous | 0.3274 | benign | 0.003 | Stabilizing | 0.974 | D | 0.706 | prob.delet. | None | None | None | None | N |
E/M | 0.4491 | ambiguous | 0.4157 | ambiguous | 0.171 | Stabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | N |
E/N | 0.2764 | likely_benign | 0.236 | benign | 0.189 | Stabilizing | 0.725 | D | 0.589 | neutral | None | None | None | None | N |
E/P | 0.4457 | ambiguous | 0.3608 | ambiguous | -0.106 | Destabilizing | 0.974 | D | 0.575 | neutral | None | None | None | None | N |
E/Q | 0.1722 | likely_benign | 0.1587 | benign | 0.212 | Stabilizing | 0.89 | D | 0.587 | neutral | N | 0.454908873 | None | None | N |
E/R | 0.3264 | likely_benign | 0.2807 | benign | 0.605 | Stabilizing | 0.974 | D | 0.547 | neutral | None | None | None | None | N |
E/S | 0.2239 | likely_benign | 0.1959 | benign | 0.07 | Stabilizing | 0.841 | D | 0.544 | neutral | None | None | None | None | N |
E/T | 0.2539 | likely_benign | 0.231 | benign | 0.212 | Stabilizing | 0.915 | D | 0.657 | prob.neutral | None | None | None | None | N |
E/V | 0.189 | likely_benign | 0.1752 | benign | -0.106 | Destabilizing | 0.966 | D | 0.608 | neutral | N | 0.471482646 | None | None | N |
E/W | 0.8989 | likely_pathogenic | 0.8695 | pathogenic | -0.219 | Destabilizing | 0.998 | D | 0.818 | deleterious | None | None | None | None | N |
E/Y | 0.5649 | likely_pathogenic | 0.5125 | ambiguous | -0.109 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.