Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25097 | 75514;75515;75516 | chr2:178570843;178570842;178570841 | chr2:179435570;179435569;179435568 |
N2AB | 23456 | 70591;70592;70593 | chr2:178570843;178570842;178570841 | chr2:179435570;179435569;179435568 |
N2A | 22529 | 67810;67811;67812 | chr2:178570843;178570842;178570841 | chr2:179435570;179435569;179435568 |
N2B | 16032 | 48319;48320;48321 | chr2:178570843;178570842;178570841 | chr2:179435570;179435569;179435568 |
Novex-1 | 16157 | 48694;48695;48696 | chr2:178570843;178570842;178570841 | chr2:179435570;179435569;179435568 |
Novex-2 | 16224 | 48895;48896;48897 | chr2:178570843;178570842;178570841 | chr2:179435570;179435569;179435568 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs777052871 | -0.14 | 0.015 | N | 0.549 | 0.284 | 0.167679373172 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/I | rs777052871 | -0.14 | 0.015 | N | 0.549 | 0.284 | 0.167679373172 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85925E-06 | 0 | 0 |
T/K | None | None | 0.883 | N | 0.792 | 0.394 | 0.214338557667 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2195 | likely_benign | 0.2733 | benign | -1.184 | Destabilizing | 0.007 | N | 0.403 | neutral | N | 0.461929404 | None | None | N |
T/C | 0.6643 | likely_pathogenic | 0.719 | pathogenic | -0.909 | Destabilizing | 0.987 | D | 0.726 | deleterious | None | None | None | None | N |
T/D | 0.9399 | likely_pathogenic | 0.9361 | pathogenic | -1.082 | Destabilizing | 0.909 | D | 0.82 | deleterious | None | None | None | None | N |
T/E | 0.9419 | likely_pathogenic | 0.9429 | pathogenic | -0.932 | Destabilizing | 0.909 | D | 0.797 | deleterious | None | None | None | None | N |
T/F | 0.9354 | likely_pathogenic | 0.9412 | pathogenic | -0.889 | Destabilizing | 0.909 | D | 0.773 | deleterious | None | None | None | None | N |
T/G | 0.569 | likely_pathogenic | 0.6168 | pathogenic | -1.581 | Destabilizing | 0.587 | D | 0.747 | deleterious | None | None | None | None | N |
T/H | 0.923 | likely_pathogenic | 0.9244 | pathogenic | -1.694 | Destabilizing | 0.996 | D | 0.73 | deleterious | None | None | None | None | N |
T/I | 0.8546 | likely_pathogenic | 0.8587 | pathogenic | -0.162 | Destabilizing | 0.015 | N | 0.549 | neutral | N | 0.460408466 | None | None | N |
T/K | 0.9455 | likely_pathogenic | 0.9451 | pathogenic | -0.722 | Destabilizing | 0.883 | D | 0.792 | deleterious | N | 0.483111532 | None | None | N |
T/L | 0.5855 | likely_pathogenic | 0.613 | pathogenic | -0.162 | Destabilizing | 0.329 | N | 0.753 | deleterious | None | None | None | None | N |
T/M | 0.4466 | ambiguous | 0.4533 | ambiguous | -0.08 | Destabilizing | 0.974 | D | 0.737 | deleterious | None | None | None | None | N |
T/N | 0.7405 | likely_pathogenic | 0.7326 | pathogenic | -1.205 | Destabilizing | 0.909 | D | 0.783 | deleterious | None | None | None | None | N |
T/P | 0.7212 | likely_pathogenic | 0.7323 | pathogenic | -0.47 | Destabilizing | 0.938 | D | 0.803 | deleterious | N | 0.458779533 | None | None | N |
T/Q | 0.9048 | likely_pathogenic | 0.9077 | pathogenic | -1.102 | Destabilizing | 0.953 | D | 0.789 | deleterious | None | None | None | None | N |
T/R | 0.9201 | likely_pathogenic | 0.923 | pathogenic | -0.769 | Destabilizing | 0.883 | D | 0.809 | deleterious | N | 0.489948387 | None | None | N |
T/S | 0.1451 | likely_benign | 0.1581 | benign | -1.502 | Destabilizing | 0.028 | N | 0.505 | neutral | N | 0.410876042 | None | None | N |
T/V | 0.6145 | likely_pathogenic | 0.6456 | pathogenic | -0.47 | Destabilizing | 0.168 | N | 0.696 | prob.delet. | None | None | None | None | N |
T/W | 0.9827 | likely_pathogenic | 0.9828 | pathogenic | -0.913 | Destabilizing | 0.996 | D | 0.757 | deleterious | None | None | None | None | N |
T/Y | 0.9434 | likely_pathogenic | 0.9474 | pathogenic | -0.598 | Destabilizing | 0.953 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.