Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25098 | 75517;75518;75519 | chr2:178570840;178570839;178570838 | chr2:179435567;179435566;179435565 |
N2AB | 23457 | 70594;70595;70596 | chr2:178570840;178570839;178570838 | chr2:179435567;179435566;179435565 |
N2A | 22530 | 67813;67814;67815 | chr2:178570840;178570839;178570838 | chr2:179435567;179435566;179435565 |
N2B | 16033 | 48322;48323;48324 | chr2:178570840;178570839;178570838 | chr2:179435567;179435566;179435565 |
Novex-1 | 16158 | 48697;48698;48699 | chr2:178570840;178570839;178570838 | chr2:179435567;179435566;179435565 |
Novex-2 | 16225 | 48898;48899;48900 | chr2:178570840;178570839;178570838 | chr2:179435567;179435566;179435565 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs747022529 | 0.114 | 0.995 | N | 0.881 | 0.348 | 0.197625483188 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 8.7E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
G/R | rs747022529 | 0.114 | 0.995 | N | 0.881 | 0.348 | 0.197625483188 | gnomAD-4.0.0 | 9.55052E-06 | None | None | None | None | N | None | 0 | 6.86028E-05 | None | 0 | 0 | None | 0 | 0 | 8.5777E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3565 | ambiguous | 0.3055 | benign | -0.426 | Destabilizing | 0.981 | D | 0.663 | prob.neutral | N | 0.497782951 | None | None | N |
G/C | 0.6307 | likely_pathogenic | 0.5585 | ambiguous | -0.914 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
G/D | 0.6024 | likely_pathogenic | 0.5089 | ambiguous | -0.31 | Destabilizing | 0.992 | D | 0.769 | deleterious | None | None | None | None | N |
G/E | 0.6059 | likely_pathogenic | 0.4948 | ambiguous | -0.424 | Destabilizing | 0.465 | N | 0.676 | prob.neutral | N | 0.437195852 | None | None | N |
G/F | 0.9178 | likely_pathogenic | 0.8931 | pathogenic | -0.886 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
G/H | 0.8459 | likely_pathogenic | 0.7981 | pathogenic | -0.74 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
G/I | 0.8416 | likely_pathogenic | 0.786 | pathogenic | -0.308 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
G/K | 0.8191 | likely_pathogenic | 0.7585 | pathogenic | -0.861 | Destabilizing | 0.992 | D | 0.849 | deleterious | None | None | None | None | N |
G/L | 0.8404 | likely_pathogenic | 0.786 | pathogenic | -0.308 | Destabilizing | 0.996 | D | 0.876 | deleterious | None | None | None | None | N |
G/M | 0.8599 | likely_pathogenic | 0.8105 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
G/N | 0.7116 | likely_pathogenic | 0.648 | pathogenic | -0.548 | Destabilizing | 0.996 | D | 0.751 | deleterious | None | None | None | None | N |
G/P | 0.9296 | likely_pathogenic | 0.928 | pathogenic | -0.308 | Destabilizing | 0.998 | D | 0.876 | deleterious | None | None | None | None | N |
G/Q | 0.728 | likely_pathogenic | 0.6606 | pathogenic | -0.76 | Destabilizing | 0.992 | D | 0.883 | deleterious | None | None | None | None | N |
G/R | 0.7009 | likely_pathogenic | 0.6293 | pathogenic | -0.519 | Destabilizing | 0.995 | D | 0.881 | deleterious | N | 0.447761941 | None | None | N |
G/S | 0.2808 | likely_benign | 0.2316 | benign | -0.836 | Destabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | N |
G/T | 0.5367 | ambiguous | 0.4655 | ambiguous | -0.859 | Destabilizing | 0.996 | D | 0.867 | deleterious | None | None | None | None | N |
G/V | 0.6912 | likely_pathogenic | 0.6135 | pathogenic | -0.308 | Destabilizing | 0.997 | D | 0.874 | deleterious | N | 0.493318493 | None | None | N |
G/W | 0.8597 | likely_pathogenic | 0.8235 | pathogenic | -1.103 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
G/Y | 0.8711 | likely_pathogenic | 0.8275 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.