Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25101 | 75526;75527;75528 | chr2:178570831;178570830;178570829 | chr2:179435558;179435557;179435556 |
N2AB | 23460 | 70603;70604;70605 | chr2:178570831;178570830;178570829 | chr2:179435558;179435557;179435556 |
N2A | 22533 | 67822;67823;67824 | chr2:178570831;178570830;178570829 | chr2:179435558;179435557;179435556 |
N2B | 16036 | 48331;48332;48333 | chr2:178570831;178570830;178570829 | chr2:179435558;179435557;179435556 |
Novex-1 | 16161 | 48706;48707;48708 | chr2:178570831;178570830;178570829 | chr2:179435558;179435557;179435556 |
Novex-2 | 16228 | 48907;48908;48909 | chr2:178570831;178570830;178570829 | chr2:179435558;179435557;179435556 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1286105524 | 0.09 | 0.071 | N | 0.315 | 0.278 | 0.300449992093 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/I | rs1286105524 | 0.09 | 0.071 | N | 0.315 | 0.278 | 0.300449992093 | gnomAD-4.0.0 | 1.59177E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8592E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1682 | likely_benign | 0.1508 | benign | -0.788 | Destabilizing | 0.914 | D | 0.505 | neutral | N | 0.465226265 | None | None | N |
T/C | 0.6564 | likely_pathogenic | 0.5739 | pathogenic | -0.551 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
T/D | 0.8053 | likely_pathogenic | 0.7392 | pathogenic | -0.334 | Destabilizing | 0.997 | D | 0.738 | deleterious | None | None | None | None | N |
T/E | 0.6455 | likely_pathogenic | 0.56 | ambiguous | -0.323 | Destabilizing | 0.997 | D | 0.729 | deleterious | None | None | None | None | N |
T/F | 0.4607 | ambiguous | 0.3933 | ambiguous | -0.75 | Destabilizing | 0.98 | D | 0.783 | deleterious | None | None | None | None | N |
T/G | 0.6572 | likely_pathogenic | 0.5945 | pathogenic | -1.065 | Destabilizing | 0.99 | D | 0.552 | neutral | None | None | None | None | N |
T/H | 0.5646 | likely_pathogenic | 0.4881 | ambiguous | -1.328 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
T/I | 0.2225 | likely_benign | 0.1957 | benign | -0.14 | Destabilizing | 0.071 | N | 0.315 | neutral | N | 0.487502534 | None | None | N |
T/K | 0.4732 | ambiguous | 0.3993 | ambiguous | -0.832 | Destabilizing | 0.987 | D | 0.735 | deleterious | D | 0.522231183 | None | None | N |
T/L | 0.1453 | likely_benign | 0.1312 | benign | -0.14 | Destabilizing | 0.707 | D | 0.543 | neutral | None | None | None | None | N |
T/M | 0.1199 | likely_benign | 0.1114 | benign | 0.082 | Stabilizing | 0.995 | D | 0.771 | deleterious | None | None | None | None | N |
T/N | 0.3952 | ambiguous | 0.3444 | ambiguous | -0.782 | Destabilizing | 0.997 | D | 0.741 | deleterious | None | None | None | None | N |
T/P | 0.3444 | ambiguous | 0.2876 | benign | -0.323 | Destabilizing | 0.996 | D | 0.771 | deleterious | N | 0.479963159 | None | None | N |
T/Q | 0.4643 | ambiguous | 0.4036 | ambiguous | -0.926 | Destabilizing | 0.997 | D | 0.78 | deleterious | None | None | None | None | N |
T/R | 0.4084 | ambiguous | 0.3435 | ambiguous | -0.608 | Destabilizing | 0.996 | D | 0.768 | deleterious | N | 0.474620787 | None | None | N |
T/S | 0.2814 | likely_benign | 0.2424 | benign | -1.049 | Destabilizing | 0.955 | D | 0.503 | neutral | N | 0.494940315 | None | None | N |
T/V | 0.1687 | likely_benign | 0.1527 | benign | -0.323 | Destabilizing | 0.499 | N | 0.519 | neutral | None | None | None | None | N |
T/W | 0.8142 | likely_pathogenic | 0.7368 | pathogenic | -0.692 | Destabilizing | 0.999 | D | 0.701 | prob.delet. | None | None | None | None | N |
T/Y | 0.5594 | ambiguous | 0.4686 | ambiguous | -0.469 | Destabilizing | 0.99 | D | 0.802 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.