Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25102 | 75529;75530;75531 | chr2:178570828;178570827;178570826 | chr2:179435555;179435554;179435553 |
N2AB | 23461 | 70606;70607;70608 | chr2:178570828;178570827;178570826 | chr2:179435555;179435554;179435553 |
N2A | 22534 | 67825;67826;67827 | chr2:178570828;178570827;178570826 | chr2:179435555;179435554;179435553 |
N2B | 16037 | 48334;48335;48336 | chr2:178570828;178570827;178570826 | chr2:179435555;179435554;179435553 |
Novex-1 | 16162 | 48709;48710;48711 | chr2:178570828;178570827;178570826 | chr2:179435555;179435554;179435553 |
Novex-2 | 16229 | 48910;48911;48912 | chr2:178570828;178570827;178570826 | chr2:179435555;179435554;179435553 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.244 | N | 0.65 | 0.267 | 0.241664281697 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5463 | ambiguous | 0.5383 | ambiguous | -1.933 | Destabilizing | 0.958 | D | 0.766 | deleterious | None | None | None | None | N |
A/D | 0.9949 | likely_pathogenic | 0.9922 | pathogenic | -3.178 | Highly Destabilizing | 0.821 | D | 0.809 | deleterious | N | 0.50296376 | None | None | N |
A/E | 0.9852 | likely_pathogenic | 0.9774 | pathogenic | -3.005 | Highly Destabilizing | 0.858 | D | 0.739 | deleterious | None | None | None | None | N |
A/F | 0.9469 | likely_pathogenic | 0.9259 | pathogenic | -0.757 | Destabilizing | 0.749 | D | 0.803 | deleterious | None | None | None | None | N |
A/G | 0.5745 | likely_pathogenic | 0.5142 | ambiguous | -1.735 | Destabilizing | 0.566 | D | 0.553 | neutral | N | 0.502710271 | None | None | N |
A/H | 0.9917 | likely_pathogenic | 0.9889 | pathogenic | -1.822 | Destabilizing | 0.986 | D | 0.805 | deleterious | None | None | None | None | N |
A/I | 0.5064 | ambiguous | 0.4503 | ambiguous | -0.311 | Destabilizing | 0.128 | N | 0.735 | deleterious | None | None | None | None | N |
A/K | 0.9942 | likely_pathogenic | 0.991 | pathogenic | -1.445 | Destabilizing | 0.858 | D | 0.759 | deleterious | None | None | None | None | N |
A/L | 0.5624 | ambiguous | 0.4954 | ambiguous | -0.311 | Destabilizing | 0.299 | N | 0.635 | neutral | None | None | None | None | N |
A/M | 0.6566 | likely_pathogenic | 0.5911 | pathogenic | -0.875 | Destabilizing | 0.919 | D | 0.832 | deleterious | None | None | None | None | N |
A/N | 0.9622 | likely_pathogenic | 0.9481 | pathogenic | -1.9 | Destabilizing | 0.949 | D | 0.804 | deleterious | None | None | None | None | N |
A/P | 0.7916 | likely_pathogenic | 0.7205 | pathogenic | -0.621 | Destabilizing | 0.933 | D | 0.803 | deleterious | N | 0.473081445 | None | None | N |
A/Q | 0.9687 | likely_pathogenic | 0.9595 | pathogenic | -1.758 | Destabilizing | 0.949 | D | 0.812 | deleterious | None | None | None | None | N |
A/R | 0.9819 | likely_pathogenic | 0.9767 | pathogenic | -1.424 | Destabilizing | 0.858 | D | 0.806 | deleterious | None | None | None | None | N |
A/S | 0.3114 | likely_benign | 0.2755 | benign | -2.17 | Highly Destabilizing | 0.392 | N | 0.61 | neutral | N | 0.490846986 | None | None | N |
A/T | 0.2956 | likely_benign | 0.2418 | benign | -1.895 | Destabilizing | 0.244 | N | 0.65 | prob.neutral | N | 0.47002048 | None | None | N |
A/V | 0.203 | likely_benign | 0.1742 | benign | -0.621 | Destabilizing | 0.005 | N | 0.331 | neutral | N | 0.469540344 | None | None | N |
A/W | 0.9969 | likely_pathogenic | 0.9951 | pathogenic | -1.433 | Destabilizing | 0.986 | D | 0.801 | deleterious | None | None | None | None | N |
A/Y | 0.9871 | likely_pathogenic | 0.9817 | pathogenic | -1.016 | Destabilizing | 0.858 | D | 0.798 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.